Class SubstanceProtein.SubstanceProteinSubunitComponent

  • All Implemented Interfaces:
    ca.uhn.fhir.model.api.IElement, Serializable, org.hl7.fhir.instance.model.api.IBase, org.hl7.fhir.instance.model.api.IBaseBackboneElement, org.hl7.fhir.instance.model.api.IBaseElement, org.hl7.fhir.instance.model.api.IBaseHasExtensions, org.hl7.fhir.instance.model.api.IBaseHasModifierExtensions
    Enclosing class:
    SubstanceProtein

    public static class SubstanceProtein.SubstanceProteinSubunitComponent
    extends BackboneElement
    implements org.hl7.fhir.instance.model.api.IBaseBackboneElement
    See Also:
    Serialized Form
    • Field Detail

      • subunit

        protected IntegerType subunit
        Index of primary sequences of amino acids linked through peptide bonds in order of decreasing length. Sequences of the same length will be ordered by molecular weight. Subunits that have identical sequences will be repeated and have sequential subscripts.
      • sequence

        protected StringType sequence
        The sequence information shall be provided enumerating the amino acids from N- to C-terminal end using standard single-letter amino acid codes. Uppercase shall be used for L-amino acids and lowercase for D-amino acids. Transcribed SubstanceProteins will always be described using the translated sequence; for synthetic peptide containing amino acids that are not represented with a single letter code an X should be used within the sequence. The modified amino acids will be distinguished by their position in the sequence.
      • length

        protected IntegerType length
        Length of linear sequences of amino acids contained in the subunit.
      • sequenceAttachment

        protected Attachment sequenceAttachment
        The sequence information shall be provided enumerating the amino acids from N- to C-terminal end using standard single-letter amino acid codes. Uppercase shall be used for L-amino acids and lowercase for D-amino acids. Transcribed SubstanceProteins will always be described using the translated sequence; for synthetic peptide containing amino acids that are not represented with a single letter code an X should be used within the sequence. The modified amino acids will be distinguished by their position in the sequence.
      • nTerminalModification

        protected StringType nTerminalModification
        The name of the fragment modified at the N-terminal of the SubstanceProtein shall be specified.