MolecularSequence.MolecularSequenceQualityRocComponent (org.hl7.fhir.r4 5.4.0 API)

java.lang.Object
- org.hl7.fhir.r4.model.Base
- - org.hl7.fhir.r4.model.Element
  - - org.hl7.fhir.r4.model.BackboneElement
    - - org.hl7.fhir.r4.model.MolecularSequence.MolecularSequenceQualityRocComponent

All Implemented Interfaces:

ca.uhn.fhir.model.api.IElement, Serializable, org.hl7.fhir.instance.model.api.IBase, org.hl7.fhir.instance.model.api.IBaseBackboneElement, org.hl7.fhir.instance.model.api.IBaseElement, org.hl7.fhir.instance.model.api.IBaseHasExtensions, org.hl7.fhir.instance.model.api.IBaseHasModifierExtensions

Enclosing class:

MolecularSequence
```
public static class MolecularSequence.MolecularSequenceQualityRocComponent
extends BackboneElement
implements org.hl7.fhir.instance.model.api.IBaseBackboneElement
```
See Also:

Serialized Form

Field Summary

Fields
Modifier and Type	Field and Description
`protected List<DecimalType>`	`fMeasure` Calculated fScore if the GQ score threshold was set to "score" field value.
`protected List<IntegerType>`	`numFN` The number of false negatives if the GQ score threshold was set to "score" field value.
`protected List<IntegerType>`	`numFP` The number of false positives if the GQ score threshold was set to "score" field value.
`protected List<IntegerType>`	`numTP` The number of true positives if the GQ score threshold was set to "score" field value.
`protected List<DecimalType>`	`precision` Calculated precision if the GQ score threshold was set to "score" field value.
`protected List<IntegerType>`	`score` Invidual data point representing the GQ (genotype quality) score threshold.
`protected List<DecimalType>`	`sensitivity` Calculated sensitivity if the GQ score threshold was set to "score" field value.

Fields inherited from class org.hl7.fhir.r4.model.BackboneElement
modifierExtension

Fields inherited from class org.hl7.fhir.r4.model.Element
extension, id

Constructor Summary

Constructors
Constructor and Description

MolecularSequenceQualityRocComponent()
Constructor

Constructors
Constructor and Description
`MolecularSequenceQualityRocComponent()` Constructor

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`Base`	`addChild(String name)`
`MolecularSequence.MolecularSequenceQualityRocComponent`	`addFMeasure(BigDecimal value)`
`DecimalType`	`addFMeasureElement()`
`MolecularSequence.MolecularSequenceQualityRocComponent`	`addNumFN(int value)`
`IntegerType`	`addNumFNElement()`
`MolecularSequence.MolecularSequenceQualityRocComponent`	`addNumFP(int value)`
`IntegerType`	`addNumFPElement()`
`MolecularSequence.MolecularSequenceQualityRocComponent`	`addNumTP(int value)`
`IntegerType`	`addNumTPElement()`
`MolecularSequence.MolecularSequenceQualityRocComponent`	`addPrecision(BigDecimal value)`
`DecimalType`	`addPrecisionElement()`
`MolecularSequence.MolecularSequenceQualityRocComponent`	`addScore(int value)`
`IntegerType`	`addScoreElement()`
`MolecularSequence.MolecularSequenceQualityRocComponent`	`addSensitivity(BigDecimal value)`
`DecimalType`	`addSensitivityElement()`
`MolecularSequence.MolecularSequenceQualityRocComponent`	`copy()`
`void`	`copyValues(MolecularSequence.MolecularSequenceQualityRocComponent dst)`
`boolean`	`equalsDeep(Base other_)`
`boolean`	`equalsShallow(Base other_)`
`String`	`fhirType()`
`List<DecimalType>`	`getFMeasure()`
`Property`	`getNamedProperty(int _hash, String _name, boolean _checkValid)`
`List<IntegerType>`	`getNumFN()`
`List<IntegerType>`	`getNumFP()`
`List<IntegerType>`	`getNumTP()`
`List<DecimalType>`	`getPrecision()`
`Base[]`	`getProperty(int hash, String name, boolean checkValid)`
`List<IntegerType>`	`getScore()`
`List<DecimalType>`	`getSensitivity()`
`String[]`	`getTypesForProperty(int hash, String name)`
`boolean`	`hasFMeasure()`
`boolean`	`hasFMeasure(BigDecimal value)`
`boolean`	`hasNumFN()`
`boolean`	`hasNumFN(int value)`
`boolean`	`hasNumFP()`
`boolean`	`hasNumFP(int value)`
`boolean`	`hasNumTP()`
`boolean`	`hasNumTP(int value)`
`boolean`	`hasPrecision()`
`boolean`	`hasPrecision(BigDecimal value)`
`boolean`	`hasScore()`
`boolean`	`hasScore(int value)`
`boolean`	`hasSensitivity()`
`boolean`	`hasSensitivity(BigDecimal value)`
`boolean`	`isEmpty()`
`protected void`	`listChildren(List<Property> children)`
`Base`	`makeProperty(int hash, String name)`
`MolecularSequence.MolecularSequenceQualityRocComponent`	`setFMeasure(List<DecimalType> theFMeasure)`
`MolecularSequence.MolecularSequenceQualityRocComponent`	`setNumFN(List<IntegerType> theNumFN)`
`MolecularSequence.MolecularSequenceQualityRocComponent`	`setNumFP(List<IntegerType> theNumFP)`
`MolecularSequence.MolecularSequenceQualityRocComponent`	`setNumTP(List<IntegerType> theNumTP)`
`MolecularSequence.MolecularSequenceQualityRocComponent`	`setPrecision(List<DecimalType> thePrecision)`
`Base`	`setProperty(int hash, String name, Base value)`
`Base`	`setProperty(String name, Base value)`
`MolecularSequence.MolecularSequenceQualityRocComponent`	`setScore(List<IntegerType> theScore)`
`MolecularSequence.MolecularSequenceQualityRocComponent`	`setSensitivity(List<DecimalType> theSensitivity)`

Methods inherited from class org.hl7.fhir.r4.model.BackboneElement
addModifierExtension, addModifierExtension, checkNoModifiers, copyValues, getModifierExtension, getModifierExtensionFirstRep, hasModifierExtension, setModifierExtension

Methods inherited from class org.hl7.fhir.r4.model.Element
addExtension, addExtension, addExtension, copyValues, getExtension, getExtensionByUrl, getExtensionFirstRep, getExtensionsByUrl, getExtensionString, getId, getIdBase, getIdElement, hasExtension, hasExtension, hasId, hasIdElement, isDisallowExtensions, noExtensions, removeExtension, setDisallowExtensions, setExtension, setId, setIdBase, setIdElement

Methods inherited from class org.hl7.fhir.r4.model.Base
castToAddress, castToAnnotation, castToAttachment, castToBase64Binary, castToBoolean, castToCanonical, castToCode, castToCodeableConcept, castToCoding, castToContactDetail, castToContactPoint, castToContributor, castToDataRequirement, castToDate, castToDateTime, castToDecimal, castToDosage, castToDuration, castToElementDefinition, castToExpression, castToExtension, castToHumanName, castToId, castToIdentifier, castToInstant, castToInteger, castToMarkdown, castToMarketingStatus, castToMeta, castToMoney, castToNarrative, castToOid, castToParameterDefinition, castToPeriod, castToPopulation, castToPositiveInt, castToProdCharacteristic, castToProductShelfLife, castToQuantity, castToRange, castToRatio, castToReference, castToRelatedArtifact, castToResource, castToSampledData, castToSignature, castToSimpleQuantity, castToString, castToSubstanceAmount, castToTime, castToTiming, castToTriggerDefinition, castToType, castToUnsignedInt, castToUri, castToUrl, castToUsageContext, castToXhtml, castToXhtmlString, children, clearUserData, compareDeep, compareDeep, compareDeep, compareDeep, compareValues, compareValues, dateTimeValue, equals, getChildByName, getFormatCommentsPost, getFormatCommentsPre, getNamedProperty, getUserData, getUserInt, getUserString, hasFormatComment, hasPrimitiveValue, hasType, hasUserData, isBooleanPrimitive, isDateTime, isMetadataBased, isPrimitive, isResource, listChildrenByName, listChildrenByName, primitiveValue, setUserData, setUserDataINN

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.hl7.fhir.instance.model.api.IBaseHasExtensions
addExtension, getExtension, hasExtension

Methods inherited from interface org.hl7.fhir.instance.model.api.IBase
getFormatCommentsPost, getFormatCommentsPre, getUserData, hasFormatComment, setUserData

Methods inherited from interface org.hl7.fhir.instance.model.api.IBaseHasModifierExtensions
addModifierExtension, getModifierExtension, hasModifierExtension

Methods inherited from interface org.hl7.fhir.instance.model.api.IBaseElement
getUserData, setUserData

- Field Detail
  - score
```
protected List<IntegerType> score
```
    Invidual data point representing the GQ (genotype quality) score threshold.
  - numTP
```
protected List<IntegerType> numTP
```
    The number of true positives if the GQ score threshold was set to "score" field value.
  - numFP
```
protected List<IntegerType> numFP
```
    The number of false positives if the GQ score threshold was set to "score" field value.
  - numFN
```
protected List<IntegerType> numFN
```
    The number of false negatives if the GQ score threshold was set to "score" field value.
  - precision
```
protected List<DecimalType> precision
```
    Calculated precision if the GQ score threshold was set to "score" field value.
  - sensitivity
```
protected List<DecimalType> sensitivity
```
    Calculated sensitivity if the GQ score threshold was set to "score" field value.
  - fMeasure
```
protected List<DecimalType> fMeasure
```
    Calculated fScore if the GQ score threshold was set to "score" field value.
- Constructor Detail
  - MolecularSequenceQualityRocComponent
```
public MolecularSequenceQualityRocComponent()
```
    Constructor
- Method Detail
  - getScore
```
public List<IntegerType> getScore()
```
    Returns:
    
    score (Invidual data point representing the GQ (genotype quality) score threshold.)
  - setScore
```
public MolecularSequence.MolecularSequenceQualityRocComponent setScore(List<IntegerType> theScore)
```
    Returns:
    
    Returns a reference to this for easy method chaining
  - hasScore
```
public boolean hasScore()
```
  - addScoreElement
```
public IntegerType addScoreElement()
```
    Returns:
    
    score (Invidual data point representing the GQ (genotype quality) score threshold.)
  - addScore
```
public MolecularSequence.MolecularSequenceQualityRocComponent addScore(int value)
```
    Parameters:
    
    value - score (Invidual data point representing the GQ (genotype quality) score threshold.)
  - hasScore
```
public boolean hasScore(int value)
```
    Parameters:
    
    value - score (Invidual data point representing the GQ (genotype quality) score threshold.)
  - getNumTP
```
public List<IntegerType> getNumTP()
```
    Returns:
    
    numTP (The number of true positives if the GQ score threshold was set to "score" field value.)
  - setNumTP
```
public MolecularSequence.MolecularSequenceQualityRocComponent setNumTP(List<IntegerType> theNumTP)
```
    Returns:
    
    Returns a reference to this for easy method chaining
  - hasNumTP
```
public boolean hasNumTP()
```
  - addNumTPElement
```
public IntegerType addNumTPElement()
```
    Returns:
    
    numTP (The number of true positives if the GQ score threshold was set to "score" field value.)
  - addNumTP
```
public MolecularSequence.MolecularSequenceQualityRocComponent addNumTP(int value)
```
    Parameters:
    
    value - numTP (The number of true positives if the GQ score threshold was set to "score" field value.)
  - hasNumTP
```
public boolean hasNumTP(int value)
```
    Parameters:
    
    value - numTP (The number of true positives if the GQ score threshold was set to "score" field value.)
  - getNumFP
```
public List<IntegerType> getNumFP()
```
    Returns:
    
    numFP (The number of false positives if the GQ score threshold was set to "score" field value.)
  - setNumFP
```
public MolecularSequence.MolecularSequenceQualityRocComponent setNumFP(List<IntegerType> theNumFP)
```
    Returns:
    
    Returns a reference to this for easy method chaining
  - hasNumFP
```
public boolean hasNumFP()
```
  - addNumFPElement
```
public IntegerType addNumFPElement()
```
    Returns:
    
    numFP (The number of false positives if the GQ score threshold was set to "score" field value.)
  - addNumFP
```
public MolecularSequence.MolecularSequenceQualityRocComponent addNumFP(int value)
```
    Parameters:
    
    value - numFP (The number of false positives if the GQ score threshold was set to "score" field value.)
  - hasNumFP
```
public boolean hasNumFP(int value)
```
    Parameters:
    
    value - numFP (The number of false positives if the GQ score threshold was set to "score" field value.)
  - getNumFN
```
public List<IntegerType> getNumFN()
```
    Returns:
    
    numFN (The number of false negatives if the GQ score threshold was set to "score" field value.)
  - setNumFN
```
public MolecularSequence.MolecularSequenceQualityRocComponent setNumFN(List<IntegerType> theNumFN)
```
    Returns:
    
    Returns a reference to this for easy method chaining
  - hasNumFN
```
public boolean hasNumFN()
```
  - addNumFNElement
```
public IntegerType addNumFNElement()
```
    Returns:
    
    numFN (The number of false negatives if the GQ score threshold was set to "score" field value.)
  - addNumFN
```
public MolecularSequence.MolecularSequenceQualityRocComponent addNumFN(int value)
```
    Parameters:
    
    value - numFN (The number of false negatives if the GQ score threshold was set to "score" field value.)
  - hasNumFN
```
public boolean hasNumFN(int value)
```
    Parameters:
    
    value - numFN (The number of false negatives if the GQ score threshold was set to "score" field value.)
  - getPrecision
```
public List<DecimalType> getPrecision()
```
    Returns:
    
    precision (Calculated precision if the GQ score threshold was set to "score" field value.)
  - setPrecision
```
public MolecularSequence.MolecularSequenceQualityRocComponent setPrecision(List<DecimalType> thePrecision)
```
    Returns:
    
    Returns a reference to this for easy method chaining
  - hasPrecision
```
public boolean hasPrecision()
```
  - addPrecisionElement
```
public DecimalType addPrecisionElement()
```
    Returns:
    
    precision (Calculated precision if the GQ score threshold was set to "score" field value.)
  - addPrecision
```
public MolecularSequence.MolecularSequenceQualityRocComponent addPrecision(BigDecimal value)
```
    Parameters:
    
    value - precision (Calculated precision if the GQ score threshold was set to "score" field value.)
  - hasPrecision
```
public boolean hasPrecision(BigDecimal value)
```
    Parameters:
    
    value - precision (Calculated precision if the GQ score threshold was set to "score" field value.)
  - getSensitivity
```
public List<DecimalType> getSensitivity()
```
    Returns:
    
    sensitivity (Calculated sensitivity if the GQ score threshold was set to "score" field value.)
  - setSensitivity
```
public MolecularSequence.MolecularSequenceQualityRocComponent setSensitivity(List<DecimalType> theSensitivity)
```
    Returns:
    
    Returns a reference to this for easy method chaining
  - hasSensitivity
```
public boolean hasSensitivity()
```
  - addSensitivityElement
```
public DecimalType addSensitivityElement()
```
    Returns:
    
    sensitivity (Calculated sensitivity if the GQ score threshold was set to "score" field value.)
  - addSensitivity
```
public MolecularSequence.MolecularSequenceQualityRocComponent addSensitivity(BigDecimal value)
```
    Parameters:
    
    value - sensitivity (Calculated sensitivity if the GQ score threshold was set to "score" field value.)
  - hasSensitivity
```
public boolean hasSensitivity(BigDecimal value)
```
    Parameters:
    
    value - sensitivity (Calculated sensitivity if the GQ score threshold was set to "score" field value.)
  - getFMeasure
```
public List<DecimalType> getFMeasure()
```
    Returns:
    
    fMeasure (Calculated fScore if the GQ score threshold was set to "score" field value.)
  - setFMeasure
```
public MolecularSequence.MolecularSequenceQualityRocComponent setFMeasure(List<DecimalType> theFMeasure)
```
    Returns:
    
    Returns a reference to this for easy method chaining
  - hasFMeasure
```
public boolean hasFMeasure()
```
  - addFMeasureElement
```
public DecimalType addFMeasureElement()
```
    Returns:
    
    fMeasure (Calculated fScore if the GQ score threshold was set to "score" field value.)
  - addFMeasure
```
public MolecularSequence.MolecularSequenceQualityRocComponent addFMeasure(BigDecimal value)
```
    Parameters:
    
    value - fMeasure (Calculated fScore if the GQ score threshold was set to "score" field value.)
  - hasFMeasure
```
public boolean hasFMeasure(BigDecimal value)
```
    Parameters:
    
    value - fMeasure (Calculated fScore if the GQ score threshold was set to "score" field value.)
  - listChildren
```
protected void listChildren(List<Property> children)
```
    Overrides:
    
    listChildren in class BackboneElement
  - getNamedProperty
```
public Property getNamedProperty(int _hash,
                                 String _name,
                                 boolean _checkValid)
                          throws org.hl7.fhir.exceptions.FHIRException
```
    Overrides:
    
    getNamedProperty in class BackboneElement
    
    Throws:
    
    org.hl7.fhir.exceptions.FHIRException
  - getProperty
```
public Base[] getProperty(int hash,
                          String name,
                          boolean checkValid)
                   throws org.hl7.fhir.exceptions.FHIRException
```
    Overrides:
    
    getProperty in class BackboneElement
    
    Throws:
    
    org.hl7.fhir.exceptions.FHIRException
  - setProperty
```
public Base setProperty(int hash,
                        String name,
                        Base value)
                 throws org.hl7.fhir.exceptions.FHIRException
```
    Overrides:
    
    setProperty in class BackboneElement
    
    Throws:
    
    org.hl7.fhir.exceptions.FHIRException
  - setProperty
```
public Base setProperty(String name,
                        Base value)
                 throws org.hl7.fhir.exceptions.FHIRException
```
    Overrides:
    
    setProperty in class BackboneElement
    
    Throws:
    
    org.hl7.fhir.exceptions.FHIRException
  - makeProperty
```
public Base makeProperty(int hash,
                         String name)
                  throws org.hl7.fhir.exceptions.FHIRException
```
    Overrides:
    
    makeProperty in class BackboneElement
    
    Throws:
    
    org.hl7.fhir.exceptions.FHIRException
  - getTypesForProperty
```
public String[] getTypesForProperty(int hash,
                                    String name)
                             throws org.hl7.fhir.exceptions.FHIRException
```
    Overrides:
    
    getTypesForProperty in class BackboneElement
    
    Throws:
    
    org.hl7.fhir.exceptions.FHIRException
  - addChild
```
public Base addChild(String name)
              throws org.hl7.fhir.exceptions.FHIRException
```
    Overrides:
    
    addChild in class BackboneElement
    
    Throws:
    
    org.hl7.fhir.exceptions.FHIRException
  - copy
```
public MolecularSequence.MolecularSequenceQualityRocComponent copy()
```
    Specified by:
    
    copy in class BackboneElement
  - copyValues
```
public void copyValues(MolecularSequence.MolecularSequenceQualityRocComponent dst)
```
  - equalsDeep
```
public boolean equalsDeep(Base other_)
```
    Overrides:
    
    equalsDeep in class BackboneElement
  - equalsShallow
```
public boolean equalsShallow(Base other_)
```
    Overrides:
    
    equalsShallow in class BackboneElement
  - isEmpty
```
public boolean isEmpty()
```
    Specified by:
    
    isEmpty in interface org.hl7.fhir.instance.model.api.IBase
    
    Overrides:
    
    isEmpty in class BackboneElement
  - fhirType
```
public String fhirType()
```
    Specified by:
    
    fhirType in interface org.hl7.fhir.instance.model.api.IBase
    
    Overrides:
    
    fhirType in class BackboneElement

Class MolecularSequence.MolecularSequenceQualityRocComponent

Field Summary

Fields inherited from class org.hl7.fhir.r4.model.BackboneElement

Fields inherited from class org.hl7.fhir.r4.model.Element

Constructor Summary

Method Summary

Methods inherited from class org.hl7.fhir.r4.model.BackboneElement

Methods inherited from class org.hl7.fhir.r4.model.Element

Methods inherited from class org.hl7.fhir.r4.model.Base

Methods inherited from class java.lang.Object

Methods inherited from interface org.hl7.fhir.instance.model.api.IBaseHasExtensions

Methods inherited from interface org.hl7.fhir.instance.model.api.IBase

Methods inherited from interface org.hl7.fhir.instance.model.api.IBaseHasModifierExtensions

Methods inherited from interface org.hl7.fhir.instance.model.api.IBaseElement

Field Detail

score

numTP

numFP

numFN

precision

sensitivity

fMeasure

Constructor Detail

MolecularSequenceQualityRocComponent

Method Detail

getScore

setScore

hasScore

addScoreElement

addScore

hasScore

getNumTP

setNumTP

hasNumTP

addNumTPElement

addNumTP

hasNumTP

getNumFP

setNumFP

hasNumFP

addNumFPElement

addNumFP

hasNumFP

getNumFN

setNumFN

hasNumFN

addNumFNElement

addNumFN

hasNumFN

getPrecision

setPrecision

hasPrecision

addPrecisionElement

addPrecision

hasPrecision

getSensitivity

setSensitivity

hasSensitivity

addSensitivityElement

addSensitivity

hasSensitivity

getFMeasure

setFMeasure

hasFMeasure

addFMeasureElement

addFMeasure

hasFMeasure

listChildren

getNamedProperty

getProperty

setProperty

setProperty

makeProperty

getTypesForProperty

addChild

copy

copyValues

equalsDeep

equalsShallow

isEmpty