Index (The OpenIMAJ Core Math Library 1.3.5 API)

A B C D E F G H I J L M N O P Q R S T U V W X Y Z

A

ABOVE - Static variable in class org.openimaj.math.geometry.shape.util.PolygonUtils: ABOVE
abs(Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils: Create a new matrix with the absolute values of the input matrix.
abs(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils: Return a copy of the input matrix with all elements set to their absolute value.
absSum(Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils: Compute the absolute sum of values in the matrix
absSumSparse(SparseColumnMatrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils
absSumSparse(SparseRowMatrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils
AbstractMultivariateDistribution - Class in org.openimaj.math.statistics.distribution: A continuous multivariate distribution.
AbstractMultivariateDistribution() - Constructor for class org.openimaj.math.statistics.distribution.AbstractMultivariateDistribution
AbstractMultivariateGaussian - Class in org.openimaj.math.statistics.distribution: Abstract base class for MultivariateGaussian implementations
AbstractMultivariateGaussian() - Constructor for class org.openimaj.math.statistics.distribution.AbstractMultivariateGaussian
AbstractPoint2d - Class in org.openimaj.math.geometry.point: Abstract base for Point2d implementations that retains the underlying precision.
AbstractPoint2d() - Constructor for class org.openimaj.math.geometry.point.AbstractPoint2d
AbstractResidualCalculator<I,D,M extends Model<I,D>> - Class in org.openimaj.math.model.fit.residuals
AbstractResidualCalculator() - Constructor for class org.openimaj.math.model.fit.residuals.AbstractResidualCalculator
add(int, int, double) - Method in class org.openimaj.math.matrix.JamaDenseMatrix
add_left(double, double) - Method in class org.openimaj.math.geometry.shape.util.polygon.PolygonNode
add_local_min(double, double) - Method in class org.openimaj.math.geometry.shape.util.polygon.TopPolygonNode
add_right(double, double) - Method in class org.openimaj.math.geometry.shape.util.polygon.PolygonNode
addConnection(int, int) - Method in class org.openimaj.math.geometry.point.PointListConnections: Add a connection between points with the given indices.
addConnection(PointList, Point2d, Point2d) - Method in class org.openimaj.math.geometry.point.PointListConnections: Add a connection between two points in the given PointList.
addConnection(PointList, Line2d) - Method in class org.openimaj.math.geometry.point.PointListConnections: Add a connection between the two end points of the given line in the given PointList.
addInnerPolygon(Polygon, boolean) - Method in class org.openimaj.math.geometry.shape.Polygon: Add an inner polygon to this polygon.
addInnerPolygon(Polygon) - Method in class org.openimaj.math.geometry.shape.Polygon: Add an inner polygon to this polygon.
addNode(double, double) - Method in class org.openimaj.math.geometry.shape.util.polygon.EdgeTable
addVertex(float, float) - Method in class org.openimaj.math.geometry.shape.Polygon: Add a vertex to the polygon
addVertex(Point2d) - Method in class org.openimaj.math.geometry.shape.Polygon: Add a vertex to the polygon
AetTree - Class in org.openimaj.math.geometry.shape.util.polygon
AetTree() - Constructor for class org.openimaj.math.geometry.shape.util.polygon.AetTree
affineMatrix(List<? extends IndependentPair<Point2d, Point2d>>) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities: Construct an affine transform using a least-squares fit of the provided point pairs.
affineMatrixND(double[][], double[][]) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities: Find the affine transform between pairs of matching points in n-dimensional space.
affineMatrixND(List<? extends IndependentPair<? extends Coordinate, ? extends Coordinate>>) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities: Find the affine transform between pairs of matching points in n-dimensional space.
AffineTransformModel - Class in org.openimaj.math.geometry.transforms: Concrete implementation of a model of an Affine transform.
AffineTransformModel() - Constructor for class org.openimaj.math.geometry.transforms.AffineTransformModel: Create an AffineTransformModel
AffineTransformModel(Predicate<AffineTransformModel>) - Constructor for class org.openimaj.math.geometry.transforms.AffineTransformModel: Create an AffineTransformModel.
AffineTransformModel3d - Class in org.openimaj.math.geometry.transforms: Concrete implementation of a model of an Affine transform.
AffineTransformModel3d() - Constructor for class org.openimaj.math.geometry.transforms.AffineTransformModel3d: Create an AffineTransformModel3d
AlgebraicResidual2d<M extends Model<Point2d,Point2d> & MatrixTransformProvider> - Class in org.openimaj.math.geometry.transforms.residuals: Compute the algebraic residuals of points mapped by a 2d homogeneous transform (i.e.
AlgebraicResidual2d() - Constructor for class org.openimaj.math.geometry.transforms.residuals.AlgebraicResidual2d
align(List<PointList>) - Method in class org.openimaj.math.geometry.shape.algorithm.GeneralisedProcrustesAnalysis: Align the input shapes to the "mean" shape.
align(PointList) - Method in class org.openimaj.math.geometry.shape.algorithm.ProcrustesAnalysis: Align the given shape to the reference.
alignPoints(List<PointList>, float, int) - Static method in class org.openimaj.math.geometry.shape.algorithm.GeneralisedProcrustesAnalysis: Align the input shapes to the "mean" shape using Generalised Procrustes Analysis.
alignPointsAndAverage(List<PointList>, PointList, double, Point2d) - Static method in class org.openimaj.math.geometry.shape.algorithm.GeneralisedProcrustesAnalysis
all(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils
and(Matrix...) - Static method in class org.openimaj.math.matrix.MatrixUtils
any(Vector) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
anyNaNorInf(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils: Are any values NaN or Inf?
appendColumn(T, Vector) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
appendRow(T, Vector) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
apply(Polyline) - Method in class org.openimaj.math.geometry.path.resample.LinearResampler
apply(double[], double[]) - Method in class org.openimaj.math.geometry.shape.PointDistributionModel.BoxConstraint
apply(double[], double[]) - Method in interface org.openimaj.math.geometry.shape.PointDistributionModel.Constraint: Apply constraints to a scaling vector so that it will generated a plausible model and return the new constrained vector.
apply(double[], double[]) - Method in class org.openimaj.math.geometry.shape.PointDistributionModel.EllipsoidConstraint
apply(double[], double[]) - Method in class org.openimaj.math.geometry.shape.PointDistributionModel.NullConstraint
apply(double[]) - Method in class org.openimaj.math.matrix.GramSchmidtProcess
applyMultiplication(double) - Method in class org.openimaj.math.matrix.JamaDenseMatrix: Multiply all elements by a constant.
approximateRotationMatrix(Matrix) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities: Given an approximate rotation matrix Q (that doesn't necessarily conform properly to a rotation matrix), return the best estimate of a rotation matrix R such that the Frobenius norm is minimised: min||r-Q||^2_F.
areAllCollinear(List<Point2d>) - Static method in class org.openimaj.math.geometry.shape.util.GrahamScan: Returns true iff all Point2ds in Point2ds are collinear.
AreaOfIntersection(Ellipse, Ellipse) - Static method in class org.openimaj.math.geometry.shape.EllipseAreaOfIntersection: Compute area of intersection.
asArray() - Method in class org.openimaj.math.matrix.JamaDenseMatrix
ASCENDING_COMPARATOR - Static variable in class org.openimaj.math.graph.SimpleWeightedEdge: Comparator for sorting edges in ascending order
asciiHeader() - Method in class org.openimaj.math.geometry.point.AbstractPoint2d
asciiHeader() - Method in class org.openimaj.math.geometry.point.PayloadCoordinate
asciiHeader() - Method in class org.openimaj.math.geometry.point.Point2dImpl
asciiHeader() - Method in class org.openimaj.math.geometry.point.Point3dImpl
asciiHeader() - Method in class org.openimaj.math.geometry.shape.Rectangle
asciiHeader() - Method in class org.openimaj.math.matrix.ReadWriteableMatrix
asciiHeader() - Method in class org.openimaj.math.matrix.similarity.SimilarityMatrix
asJama(Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils
asMat(MLArray) - Static method in class org.openimaj.math.matrix.CFMatrixUtils: Convert a matlab MLArray to a Matrix
asMatlab(Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
asPolygon() - Method in class org.openimaj.math.geometry.shape.Circle
asPolygon() - Method in class org.openimaj.math.geometry.shape.Ellipse
asPolygon() - Method in class org.openimaj.math.geometry.shape.Polygon: Convert the shape to a polygon representation
asPolygon() - Method in class org.openimaj.math.geometry.shape.Rectangle
asPolygon() - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
asPolygon() - Method in interface org.openimaj.math.geometry.shape.Shape: Convert the shape to a polygon representation
asPolygon() - Method in class org.openimaj.math.geometry.shape.Triangle
asPolyline() - Method in class org.openimaj.math.geometry.line.Line2d
asPolyline() - Method in interface org.openimaj.math.geometry.path.Path2d: Convert the path to a polyline representation
asPolyline() - Method in class org.openimaj.math.geometry.path.Polyline
assertInvariant() - Method in class org.openimaj.math.matrix.JamaDenseMatrix
asSparseColumn(Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils
asSparseRow(Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils: Convert a Matrix to a SparseRowMatrix

B

Base(List<? extends IndependentPair<? extends Point2d, ? extends Point2d>>) - Constructor for class org.openimaj.math.geometry.transforms.FundamentalRefinement.Base
basis - Variable in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis
BED - Static variable in class org.openimaj.math.geometry.shape.util.polygon.VertexType: Bottom edge
begin - Variable in class org.openimaj.math.geometry.line.Line2d: Start point of line
begin() - Method in class org.openimaj.math.geometry.line.Line2d
begin() - Method in interface org.openimaj.math.geometry.path.Path2d: Get the beginning of the path
begin() - Method in class org.openimaj.math.geometry.path.Polyline
BELOW - Static variable in class org.openimaj.math.geometry.shape.util.PolygonUtils: BELOW
BestFitStoppingCondition() - Constructor for class org.openimaj.math.model.fit.RANSAC.BestFitStoppingCondition
bestModel - Variable in class org.openimaj.math.model.fit.LMedS
bestModelInliers - Variable in class org.openimaj.math.model.fit.RANSAC
bestModelOutliers - Variable in class org.openimaj.math.model.fit.RANSAC
bestSubGraph - Variable in class org.openimaj.math.graph.algorithm.CharikarDensestSubgraph
BH - Static variable in class org.openimaj.math.geometry.shape.util.polygon.HState: Bottom horizontal edge
bicubicInterp(double, double, double[][]) - Static method in class org.openimaj.math.util.Interpolation: Bicubic interpolation of the value at x,y where 0<=x<=1 and 0<=y<=1 given the values at integer coordinates from (-1,-1) to (3,3).
bicubicInterp(float, float, float[][]) - Static method in class org.openimaj.math.util.Interpolation: Bicubic interpolation of the value at x,y where 0<=x<=1 and 0<=y<=1 given the values at integer coordinates from (-1,-1) to (3,3).
bilerp(double, double, double, double, double, double) - Static method in class org.openimaj.math.util.Interpolation: Bilinear interpolation of the value at x,y where 0<=x<=1 and 0<=y<=1 given the values at (0,0), (0,1), (1,0) and (1,1).
bilerp(float, float, float, float, float, float) - Static method in class org.openimaj.math.util.Interpolation: Bilinear interpolation of the value at x,y where 0<=x<=1 and 0<=y<=1 given the values at (0,0), (0,1), (1,0) and (1,1).
bilerpf(float, float, float, float, float, float) - Static method in class org.openimaj.math.util.Interpolation: Bilinear interpolation of the value at x,y where 0<=x<=1 and 0<=y<=1 given the values at (0,0), (0,1), (1,0) and (1,1).
binaryHeader() - Method in class org.openimaj.math.geometry.point.AbstractPoint2d
binaryHeader() - Method in class org.openimaj.math.geometry.point.PayloadCoordinate
binaryHeader() - Method in class org.openimaj.math.geometry.point.Point2dImpl
binaryHeader() - Method in class org.openimaj.math.geometry.point.Point3dImpl
binaryHeader() - Method in class org.openimaj.math.geometry.shape.Rectangle
binaryHeader() - Method in class org.openimaj.math.matrix.ReadWriteableMatrix
binaryHeader() - Method in class org.openimaj.math.matrix.similarity.SimilarityMatrix
bot - Variable in class org.openimaj.math.geometry.shape.util.polygon.EdgeNode: Edge lower (x, y) coordinate
BoxConstraint(double) - Constructor for class org.openimaj.math.geometry.shape.PointDistributionModel.BoxConstraint: Construct with the given multiplier of the standard deviation.
bside - Variable in class org.openimaj.math.geometry.shape.util.polygon.EdgeNode: Bundle left / right indicators
bstate - Variable in class org.openimaj.math.geometry.shape.util.polygon.EdgeNode: Edge bundle state
BucketingSampler2d - Class in org.openimaj.math.geometry.transforms.estimation.sampling: Implementation of the bucketing sampling strategy proposed by Zhang et al to try and ensure a good spatial distribution of point-pairs for estimation of geometric transforms and the fundamental matrix.
BucketingSampler2d() - Constructor for class org.openimaj.math.geometry.transforms.estimation.sampling.BucketingSampler2d: Construct the sampler with the default number of buckets in the x and y dimensions (8).
BucketingSampler2d(int, int) - Constructor for class org.openimaj.math.geometry.transforms.estimation.sampling.BucketingSampler2d: Construct the sampler with the given number of buckets in each dimension.
build_sbt() - Method in class org.openimaj.math.geometry.shape.util.polygon.ScanBeamTreeEntries
buildNormalisedDataMatrix(Matrix) - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis: Zero-centre the data matrix and return a copy
bundle - Variable in class org.openimaj.math.geometry.shape.util.polygon.EdgeNode: Bundle edge flags
BUNDLE_HEAD - Static variable in class org.openimaj.math.geometry.shape.util.polygon.BundleState
BUNDLE_TAIL - Static variable in class org.openimaj.math.geometry.shape.util.polygon.BundleState
BundleState - Class in org.openimaj.math.geometry.shape.util.polygon: Edge bundle state

C

cacheValues() - Method in class org.openimaj.math.statistics.distribution.CachingMultivariateGaussian
CachingMultivariateGaussian - Class in org.openimaj.math.statistics.distribution: A single multidimensional Gaussian.
CachingMultivariateGaussian() - Constructor for class org.openimaj.math.statistics.distribution.CachingMultivariateGaussian
CachingMultivariateGaussian(Matrix, Matrix) - Constructor for class org.openimaj.math.statistics.distribution.CachingMultivariateGaussian: Construct the Gaussian with the provided center and covariance
CachingMultivariateGaussian(int) - Constructor for class org.openimaj.math.statistics.distribution.CachingMultivariateGaussian: Construct the Gaussian with the zero mean and unit variance
calculateArea() - Method in class org.openimaj.math.geometry.shape.Circle
calculateArea() - Method in class org.openimaj.math.geometry.shape.Ellipse
calculateArea() - Method in class org.openimaj.math.geometry.shape.Polygon
calculateArea() - Method in class org.openimaj.math.geometry.shape.Rectangle
calculateArea() - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
calculateArea() - Method in interface org.openimaj.math.geometry.shape.Shape: Calculate the area of the shape
calculateArea() - Method in class org.openimaj.math.geometry.shape.Triangle
calculateCentroid() - Method in interface org.openimaj.math.geometry.GeometricObject2d: Calculate the centroid of the shape
calculateCentroid() - Method in class org.openimaj.math.geometry.line.Line2d
calculateCentroid() - Method in class org.openimaj.math.geometry.point.PointList: Get the centre of gravity of the PointList
calculateCentroid() - Method in class org.openimaj.math.geometry.shape.Circle
calculateCentroid() - Method in class org.openimaj.math.geometry.shape.Ellipse
calculateCentroid() - Method in class org.openimaj.math.geometry.shape.Polygon: Calculate the centroid of the polygon.
calculateCentroid() - Method in class org.openimaj.math.geometry.shape.Rectangle
calculateCentroid() - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
calculateCentroid() - Method in class org.openimaj.math.geometry.shape.Triangle
calculateConvexHull() - Method in class org.openimaj.math.geometry.point.PointList: Calculate the convex hull of the points using the Graham Scan algorithm.
calculateConvexHullMelkman() - Method in class org.openimaj.math.geometry.shape.Polygon: Calculate convex hull using Melkman's algorithm.
calculateDensestSubgraph() - Method in class org.openimaj.math.graph.algorithm.CharikarDensestSubgraph
calculateDensity(Graph<?, ?>) - Static method in class org.openimaj.math.graph.algorithm.CharikarDensestSubgraph: Calculate the density of the graph as the number of edges divided by the number of vertices
calculateDirection() - Method in class org.openimaj.math.geometry.shape.Polygon: Calculates the principle direction of the connected component.
calculateFirstMoment() - Method in class org.openimaj.math.geometry.shape.Polygon: Treating the polygon as a continuous piecewise function, calculate exactly the first moment.
calculateHorizontalAngle() - Method in class org.openimaj.math.geometry.line.Line2d: Returns the angle (radians) this line makes with a horizontal line
calculateLength() - Method in class org.openimaj.math.geometry.line.Line2d
calculateLength() - Method in interface org.openimaj.math.geometry.path.Path2d: Calculate the length of the path
calculateLength() - Method in class org.openimaj.math.geometry.path.Polyline
calculateNormal(Point2d, PointList) - Method in class org.openimaj.math.geometry.point.PointListConnections: Calculate the normal vector at a given vertex.
calculateNormal(int, PointList) - Method in class org.openimaj.math.geometry.point.PointListConnections: Calculate the normal vector at a given vertex id.
calculateNormalLine(Point2d, PointList, float) - Method in class org.openimaj.math.geometry.point.PointListConnections: Calculate a normal line for a given vertex.
calculateNormalLine(int, PointList, float) - Method in class org.openimaj.math.geometry.point.PointListConnections: Calculate a normal line for a given vertex.
calculateOrientedBoundingBox() - Method in class org.openimaj.math.geometry.shape.Ellipse: Calculate the oriented bounding box.
calculatePerimeter() - Method in class org.openimaj.math.geometry.shape.Circle
calculatePerimeter() - Method in class org.openimaj.math.geometry.shape.Ellipse
calculatePerimeter() - Method in class org.openimaj.math.geometry.shape.Polygon
calculatePerimeter() - Method in class org.openimaj.math.geometry.shape.Rectangle
calculatePerimeter() - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
calculatePerimeter() - Method in interface org.openimaj.math.geometry.shape.Shape: Calculate the perimeter of the shape
calculatePerimeter() - Method in class org.openimaj.math.geometry.shape.Triangle
calculateRegularBoundingBox() - Method in interface org.openimaj.math.geometry.GeometricObject2d: Compute the regular (oriented to the axes) bounding box of the shape.
calculateRegularBoundingBox() - Method in class org.openimaj.math.geometry.line.Line2d
calculateRegularBoundingBox() - Method in class org.openimaj.math.geometry.point.PointList: Compute the regular (oriented to the axes) bounding box of the PointList.
calculateRegularBoundingBox() - Method in class org.openimaj.math.geometry.shape.Circle
calculateRegularBoundingBox() - Method in class org.openimaj.math.geometry.shape.Ellipse
calculateRegularBoundingBox() - Method in class org.openimaj.math.geometry.shape.Polygon: Compute the regular (oriented to the axes) bounding box of the polygon.
calculateRegularBoundingBox() - Method in class org.openimaj.math.geometry.shape.Rectangle
calculateRegularBoundingBox() - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
calculateRegularBoundingBox() - Method in class org.openimaj.math.geometry.shape.Triangle
calculateSecondMoment() - Method in class org.openimaj.math.geometry.shape.Polygon: Treating the polygon as a continuous piecewise function, calculate exactly the second moment.
calculateSecondMomentCentralised() - Method in class org.openimaj.math.geometry.shape.Polygon: Treating the polygon as a continuous piecewise function, calculate exactly the centralised second moment.
calculateSignedArea() - Method in class org.openimaj.math.geometry.shape.Polygon: Calculate the area of the polygon.
calculateVerticalAngle() - Method in class org.openimaj.math.geometry.line.Line2d: Returns the angle (radians) this line makes with a vertical line
centeredRotationMatrix(double, int, int) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities: Construct a rotation about the centre of the rectangle defined by width and height (i.e.
centre - Variable in class org.openimaj.math.geometry.shape.Circle
CFMatrixUtils - Class in org.openimaj.math.matrix: Utility methods for dealing with the cognitive foundry Matrix.
CFMatrixUtils() - Constructor for class org.openimaj.math.matrix.CFMatrixUtils
CharikarDensestSubgraph<V,E> - Class in org.openimaj.math.graph.algorithm: Implementation of Charikar's greedy Densest-subgraph algorithm for unweighted, undirected graphs.
CharikarDensestSubgraph(UndirectedGraph<V, E>) - Constructor for class org.openimaj.math.graph.algorithm.CharikarDensestSubgraph: Compute the densest subgraph of a graph.
check(double) - Method in interface org.openimaj.math.util.distance.DistanceCheck: Test the distance
check(double) - Method in class org.openimaj.math.util.distance.ModelDistanceCheck
check(double) - Method in class org.openimaj.math.util.distance.ThresholdDistanceCheck
choldowndate(double[]) - Method in class org.openimaj.math.matrix.UpdateableCholeskyDecomposition
choldowndate(double[], boolean) - Method in class org.openimaj.math.matrix.UpdateableCholeskyDecomposition: see UpdateableCholeskyDecomposition.choldowndate(double[][], double[])
choldowndate(double[][], double[]) - Static method in class org.openimaj.math.matrix.UpdateableCholeskyDecomposition: Updates L such that the matrix A where: A = LL* becomes A = A - xx*
cholupdate(double[]) - Method in class org.openimaj.math.matrix.UpdateableCholeskyDecomposition: See UpdateableCholeskyDecomposition.cholupdate(double[][], double[])
cholupdate(double[], boolean) - Method in class org.openimaj.math.matrix.UpdateableCholeskyDecomposition: See UpdateableCholeskyDecomposition.cholupdate(double[][], double[])
cholupdate(double[][], double[]) - Static method in class org.openimaj.math.matrix.UpdateableCholeskyDecomposition: Updates L such that the matrix A where: A = LL* becomes A = A + xx*
chooseOptimalParameterisation(Matrix, double[]) - Static method in enum org.openimaj.math.geometry.transforms.FundamentalRefinement.Parameterisation: Choose the optimal parameterisation of F that preserves the rank-2 constraint by re-writing one of the rows as a weighted combination of the other two.
Circle - Class in org.openimaj.math.geometry.shape: A circle shape
Circle(float, float, float) - Constructor for class org.openimaj.math.geometry.shape.Circle: Construct a circle with the given position and radius
Circle(Point2d, float) - Constructor for class org.openimaj.math.geometry.shape.Circle: Construct a circle with the given position and radius
Circle(Circle) - Constructor for class org.openimaj.math.geometry.shape.Circle: Construct a circle with the given circle
clear() - Method in class org.openimaj.math.util.RunningStat: Reset the running stats
CLIP - Static variable in class org.openimaj.math.geometry.shape.util.PolygonUtils: CLIP
clone() - Method in class org.openimaj.math.geometry.line.Line2d
clone() - Method in class org.openimaj.math.geometry.point.Point2dImpl
clone() - Method in class org.openimaj.math.geometry.point.Point3dImpl
clone() - Method in class org.openimaj.math.geometry.point.PointList
clone() - Method in class org.openimaj.math.geometry.shape.Circle
clone() - Method in class org.openimaj.math.geometry.shape.Ellipse
clone() - Method in class org.openimaj.math.geometry.shape.Polygon
clone() - Method in class org.openimaj.math.geometry.shape.Rectangle
clone() - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
clone() - Method in interface org.openimaj.math.geometry.shape.Shape
clone() - Method in class org.openimaj.math.geometry.shape.Triangle
clone() - Method in class org.openimaj.math.geometry.transforms.AffineTransformModel
clone() - Method in class org.openimaj.math.geometry.transforms.AffineTransformModel3d
clone() - Method in class org.openimaj.math.geometry.transforms.FundamentalModel: Clone the model
clone() - Method in class org.openimaj.math.geometry.transforms.HomographyModel
clone() - Method in class org.openimaj.math.geometry.transforms.NullModel
clone() - Method in class org.openimaj.math.geometry.transforms.RigidTransformModel3d
clone() - Method in class org.openimaj.math.matrix.similarity.SimilarityMatrix
clone() - Method in interface org.openimaj.math.model.EstimatableModel: Clone the model
clone() - Method in class org.openimaj.math.model.GaussianVectorNaiveBayesModel
clone() - Method in class org.openimaj.math.model.LeastSquaresLinearModel
clone() - Method in class org.openimaj.math.model.UnivariateGaussianNaiveBayesModel
close() - Method in class org.openimaj.math.geometry.shape.Polygon: Close the polygon if it's not already closed
closestPoint(Point2d) - Method in class org.openimaj.math.geometry.shape.Polygon: Find the closest point on the polygon to the given point
colMean(Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils
colSparcity(Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils: Compute the proportion of completely zero columns to columns with non-zero values
columnCount() - Method in class org.openimaj.math.matrix.DiagonalMatrix
columnCount() - Method in class org.openimaj.math.matrix.JamaDenseMatrix
comparator - Variable in class org.openimaj.math.model.fit.residuals.DistanceComparatorResidual
compare(MultivariateGaussian, MultivariateGaussian) - Method in class org.openimaj.math.statistics.distribution.metrics.GaussianKLDivergence
compare(MultivariateDistribution, MultivariateDistribution) - Method in class org.openimaj.math.statistics.distribution.metrics.SampledMultivariateDistanceComparator
Complex - Class in org.openimaj.math.util: Data structure for a complex number with real and imaginary parts.
Complex() - Constructor for class org.openimaj.math.util.Complex: Create a complex number with real and imaginary parts set to 0.
Complex(double, double) - Constructor for class org.openimaj.math.util.Complex: Create a complex number with the specified real and imaginary values.
computeCovariance(float[][]) - Static method in class org.openimaj.math.statistics.MeanAndCovariance: Get the covariance of the data
computeCovariance(double[][]) - Static method in class org.openimaj.math.statistics.MeanAndCovariance: Get the covariance of the data
computeCovariance(Matrix) - Static method in class org.openimaj.math.statistics.MeanAndCovariance: Get the covariance of the data
computeError(Matrix, List<? extends IndependentPair<? extends Point2d, ? extends Point2d>>) - Method in enum org.openimaj.math.geometry.transforms.HomographyRefinement: Compute the error value being optimised between the two point sets.
computeInitialFeasibleSolution() - Method in class org.openimaj.math.combinatorics.optimisation.HungarianAlgorithm: Compute an initial feasible solution by assigning zero labels to the workers and by assigning to each job a label equal to the minimum cost among its incident edges.
computeIntrinsicScale() - Method in class org.openimaj.math.geometry.point.PointList: Calculate the intrinsic scale of the shape.
computeMean(Collection<PointList>) - Static method in class org.openimaj.math.geometry.point.PointList: Compute the mean of a set of PointLists.
computeMean(float[][]) - Static method in class org.openimaj.math.statistics.MeanAndCovariance: Get the mean of the data
computeMean(double[][]) - Static method in class org.openimaj.math.statistics.MeanAndCovariance: Get the mean of the data
computeMean(Matrix) - Static method in class org.openimaj.math.statistics.MeanAndCovariance: Get the mean of the data
computeProcrustesDistance(PointList, PointList) - Static method in class org.openimaj.math.geometry.shape.algorithm.ProcrustesAnalysis: Compute the Procrustes Distance between two PointLists.
computeResidual(IndependentPair<Point2d, Point2d>) - Method in class org.openimaj.math.geometry.transforms.FundamentalModel.EpipolarResidual
computeResidual(IndependentPair<Point2d, Point2d>) - Method in class org.openimaj.math.geometry.transforms.FundamentalModel.Fundamental8PtResidual
computeResidual(IndependentPair<Point2d, Point2d>) - Method in class org.openimaj.math.geometry.transforms.FundamentalModel.SampsonGeometricResidual
computeResidual(IndependentPair<Point2d, Point2d>) - Method in class org.openimaj.math.geometry.transforms.residuals.AlgebraicResidual2d
computeResidual(IndependentPair<Point2d, Point2d>) - Method in class org.openimaj.math.geometry.transforms.residuals.SingleImageTransferResidual2d
computeResidual(IndependentPair<Point2d, Point2d>) - Method in class org.openimaj.math.geometry.transforms.residuals.SymmetricTransferResidual2d
computeResidual(IndependentPair<Point2d, Point2d>) - Method in class org.openimaj.math.geometry.transforms.residuals.TransformedSITR2d
computeResidual(IndependentPair<I, D>) - Method in class org.openimaj.math.model.fit.residuals.DistanceComparatorResidual
computeResidual(IndependentPair<I, D>) - Method in interface org.openimaj.math.model.fit.residuals.ResidualCalculator: Compute the residual for a single point
computeResiduals(List<? extends IndependentPair<Point2d, Point2d>>, double[]) - Method in class org.openimaj.math.geometry.transforms.residuals.AlgebraicResidual2d
computeResiduals(List<? extends IndependentPair<Point2d, Point2d>>, double[]) - Method in class org.openimaj.math.geometry.transforms.residuals.SingleImageTransferResidual2d
computeResiduals(List<? extends IndependentPair<Point2d, Point2d>>, double[]) - Method in class org.openimaj.math.geometry.transforms.residuals.SymmetricTransferResidual2d
computeResiduals(List<? extends IndependentPair<Point2d, Point2d>>, double[]) - Method in class org.openimaj.math.geometry.transforms.residuals.TransformedSITR2d
computeResiduals(List<? extends IndependentPair<I, D>>, double[]) - Method in class org.openimaj.math.model.fit.residuals.AbstractResidualCalculator
computeResiduals(List<? extends IndependentPair<I, D>>, double[]) - Method in interface org.openimaj.math.model.fit.residuals.ResidualCalculator: Compute the residual for a set of data points
computeScale(PointList, double, double) - Static method in class org.openimaj.math.geometry.shape.algorithm.ProcrustesAnalysis
computeVoronoiEdges(List<? extends Point2d>) - Static method in class org.openimaj.math.geometry.triangulation.Voronoi: Compute the Voronoi diagram as a list of its edges
computeVoronoiEdges(List<? extends Point2d>, double, double) - Static method in class org.openimaj.math.geometry.triangulation.Voronoi: Compute the Voronoi diagram as a list of its edges
computeVoronoiGraph(List<? extends Point2d>) - Static method in class org.openimaj.math.geometry.triangulation.Voronoi: Compute the Voronoi diagram as a graph of its vertices
computeVoronoiGraph(List<? extends Point2d>, double, double) - Static method in class org.openimaj.math.geometry.triangulation.Voronoi: Compute the Voronoi diagram as a graph of its vertices
computeWeightedLogProb(double[][]) - Method in class org.openimaj.math.statistics.distribution.MixtureOfGaussians
constraint - Variable in class org.openimaj.math.geometry.shape.PointDistributionModel
containsInfinity(Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils
containsNaN(Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils
containsNaN(Vector) - Static method in class org.openimaj.math.matrix.CFMatrixUtils
convert(DenseMatrix) - Static method in class org.openimaj.math.matrix.MatrixUtils: Convert a DenseMatrix to a Matrix.
convert(DenseMatrix, int, int) - Static method in class org.openimaj.math.matrix.MatrixUtils: Convert a DenseMatrix to a Matrix.
ConvexityCheck2D<M extends Model<Point2d,Point2d> & MatrixTransformProvider> - Class in org.openimaj.math.geometry.transforms.check: Test that a 2d transform model preserves convexity
ConvexityCheck2D() - Constructor for class org.openimaj.math.geometry.transforms.check.ConvexityCheck2D
ConvexityDefect - Class in org.openimaj.math.geometry.shape.algorithm: Class representing a convexity defect of a polygon, with methods for finding said defects.
Coordinate - Interface in org.openimaj.math.geometry.point: Generic interface to get the distance along a dimension of an object representing a point in an n-dimensional space
copy() - Method in interface org.openimaj.math.geometry.point.Point2d: Clone the point
copy() - Method in class org.openimaj.math.geometry.point.Point2dImpl
copy() - Method in interface org.openimaj.math.geometry.point.Point3d: Clone the point
copy() - Method in class org.openimaj.math.geometry.point.Point3dImpl
copy(T) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils: Copy a matrix
copy() - Method in class org.openimaj.math.matrix.similarity.SimilarityMatrix
copyFrom(Point2d) - Method in class org.openimaj.math.geometry.point.AbstractPoint2d
copyFrom(Point2d) - Method in interface org.openimaj.math.geometry.point.Point2d: Copy the values of the given point into this point.
copyFrom(Point2d) - Method in class org.openimaj.math.geometry.point.Point2dImpl
copyFrom(Point3d) - Method in interface org.openimaj.math.geometry.point.Point3d: Copy the values of the given point into this point.
copyFrom(Point3d) - Method in class org.openimaj.math.geometry.point.Point3dImpl
count_contours() - Method in class org.openimaj.math.geometry.shape.util.polygon.TopPolygonNode
covar - Variable in class org.openimaj.math.statistics.distribution.CachingMultivariateGaussian
covar - Variable in class org.openimaj.math.statistics.distribution.FullMultivariateGaussian: The covariance matrix
covar - Variable in class org.openimaj.math.statistics.MeanAndCovariance: The covariance matrix (NxN)
covariance(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils: Compute the covariance matrix of the given samples (assumed each sample is a row).
CovarPrincipalComponentAnalysis - Class in org.openimaj.math.matrix.algorithm.pca: Naive Principle Component Analysis performed by directly calculating the covariance matrix and then performing an Eigen decomposition.
CovarPrincipalComponentAnalysis() - Constructor for class org.openimaj.math.matrix.algorithm.pca.CovarPrincipalComponentAnalysis: Construct a CovarPrincipalComponentAnalysis that will extract all the eigenvectors.
CovarPrincipalComponentAnalysis(int) - Constructor for class org.openimaj.math.matrix.algorithm.pca.CovarPrincipalComponentAnalysis: Construct a CovarPrincipalComponentAnalysis that will extract the n best eigenvectors.
createRandomPoint() - Static method in class org.openimaj.math.geometry.point.Point2dImpl: Create a random point in ([0..1], [0..1]).
createRandomPoint(Random) - Static method in class org.openimaj.math.geometry.point.Point2dImpl: Create a random point in ([0..1], [0..1]) with the given random number generator.
createRandomPoint() - Static method in class org.openimaj.math.geometry.point.Point3dImpl: Create a random point in ([0..1], [0..1], [0..1]).
cubicInterp(double, double, double, double, double) - Static method in class org.openimaj.math.util.Interpolation: Cubic interpolation of y at x (in 0..1) given y at x=[-1, 0, 1, 2]
cubicInterp(float, float, float, float, float) - Static method in class org.openimaj.math.util.Interpolation: Cubic interpolation of y at x (in 0..1) given y at x=[-1, 0, 1, 2]
cubicInterp(double, double[]) - Static method in class org.openimaj.math.util.Interpolation: Cubic interpolation of y at x (in 0..1) given y at x=[-1, 0, 1, 2]
cubicInterp(float, float[]) - Static method in class org.openimaj.math.util.Interpolation: Cubic interpolation of y at x (in 0..1) given y at x=[-1, 0, 1, 2]
cx - Variable in class org.openimaj.math.geometry.shape.RotatedRectangle: The x-ordinate of the centroid
cy - Variable in class org.openimaj.math.geometry.shape.RotatedRectangle: The y-ordinate of the centroid

D

dc - Variable in class org.openimaj.math.model.fit.RANSAC
deepestPoint - Variable in class org.openimaj.math.geometry.shape.algorithm.ConvexityDefect: The deepest point on the shape polygon
DEFAULT_N_BUCKETS_PER_DIM - Static variable in class org.openimaj.math.geometry.transforms.estimation.sampling.BucketingSampler2d: Default number of buckets per dimension
DelaunayTriangulator - Class in org.openimaj.math.geometry.triangulation: The Delaunay Triangulation algorithm.
DelaunayTriangulator() - Constructor for class org.openimaj.math.geometry.triangulation.DelaunayTriangulator
denormalise(double[]) - Method in interface org.openimaj.math.statistics.normalisation.Denormaliser: Deormalise the vector.
denormalise(double[][]) - Method in interface org.openimaj.math.statistics.normalisation.Denormaliser: Denormalise the data.
denormalise(double[]) - Method in class org.openimaj.math.statistics.normalisation.ZScore
denormalise(double[][]) - Method in class org.openimaj.math.statistics.normalisation.ZScore
denormaliseFundamental(Pair<Matrix>) - Method in class org.openimaj.math.geometry.transforms.FundamentalModel: De-normalise a fundamental estimate.
denormaliseHomography(Pair<Matrix>) - Method in class org.openimaj.math.geometry.transforms.HomographyModel: De-normalise a homography estimate.
Denormaliser - Interface in org.openimaj.math.statistics.normalisation: Interface for objects that con both normalise and denormalise data.
depth - Variable in class org.openimaj.math.geometry.shape.algorithm.ConvexityDefect: The depth of the deepest point
DESCENDING_COMPARATOR - Static variable in class org.openimaj.math.graph.SimpleWeightedEdge: Comparator for sorting edges in descending order
diag(Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils: Extract the diagonal elements as a vector
diag(double[]) - Static method in class org.openimaj.math.matrix.MatrixUtils: Create a diagonal matrix
diag(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils: Extract the diagonal component from the given matrix
DiagonalMatrix - Class in org.openimaj.math.matrix
DiagonalMatrix(int) - Constructor for class org.openimaj.math.matrix.DiagonalMatrix: New empty matrix with 0s down the diagonals
DiagonalMatrix(int, double) - Constructor for class org.openimaj.math.matrix.DiagonalMatrix: New empty matrix with val down the diagonals
DiagonalMatrix(double[][]) - Constructor for class org.openimaj.math.matrix.DiagonalMatrix: Diagonal version of the matrix handed
DiagonalMatrix(Matrix) - Constructor for class org.openimaj.math.matrix.DiagonalMatrix
DiagonalMultivariateGaussian - Class in org.openimaj.math.statistics.distribution: Implementation of a MultivariateGaussian with a diagonal covariance matrix.
DiagonalMultivariateGaussian(Matrix, double[]) - Constructor for class org.openimaj.math.statistics.distribution.DiagonalMultivariateGaussian: Construct the Gaussian with the provided center and covariance
DiagonalMultivariateGaussian(int) - Constructor for class org.openimaj.math.statistics.distribution.DiagonalMultivariateGaussian: Construct the Gaussian with the zero mean and unit variance
diagVector(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils: Extract the diagonal component from the given matrix
difference(Polygon) - Method in class org.openimaj.math.geometry.shape.Polygon: Calculates the difference between two polygons and returns a new polygon.
distance(Point2d, Point2d) - Static method in class org.openimaj.math.geometry.line.Line2d: Get the Euclidean distance between two points
distance(float, float, float, float) - Static method in class org.openimaj.math.geometry.line.Line2d: Get the Euclidean distance between two points
DistanceCheck - Interface in org.openimaj.math.util.distance: Interface for a class that can perform a check on the distance or error between a pair of items to see if they match.
DistanceComparatorResidual<I,D,M extends Model<I,D>> - Class in org.openimaj.math.model.fit.residuals: An implementation of a ResidualCalculator that uses a DistanceComparator to compute the error between the predicted and observed data point.
DistanceComparatorResidual(DistanceComparator<D>) - Constructor for class org.openimaj.math.model.fit.residuals.DistanceComparatorResidual: Construct with the given DistanceComparator.
distanceToLine(Point2d) - Method in class org.openimaj.math.geometry.line.Line2d: Returns the shortest distance between the point and this line.
dotProduct(Matrix, Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils: Compute the dot product X.W
dotProductTranspose(Matrix, Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils: Compute Y = A .
dotProductTranspose(Matrix, Matrix, T) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils: Y = A .
dotProductTransposeTranspose(Matrix, Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils: Perform: A.T.dot(B.T) without performing the transpose.
DoubleArrayStatsUtils - Class in org.openimaj.math.util: Some basic statistical operations on double arrays
DoubleArrayStatsUtils() - Constructor for class org.openimaj.math.util.DoubleArrayStatsUtils
dx - Variable in class org.openimaj.math.geometry.shape.util.polygon.EdgeNode: Change in x for a unit y increase
dx - Variable in class org.openimaj.math.geometry.shape.util.polygon.StNode: Change in x for a unit y increase

E

EconomySVD - Class in no.uib.cipr.matrix: Computes economy singular value decompositions.
EconomySVD(int, int) - Constructor for class no.uib.cipr.matrix.EconomySVD: Creates an empty SVD
edge - Variable in class org.openimaj.math.geometry.shape.util.polygon.StNode: Pointer to AET edge
EdgeNode - Class in org.openimaj.math.geometry.shape.util.polygon
EdgeNode() - Constructor for class org.openimaj.math.geometry.shape.util.polygon.EdgeNode
EdgeTable - Class in org.openimaj.math.geometry.shape.util.polygon
EdgeTable() - Constructor for class org.openimaj.math.geometry.shape.util.polygon.EdgeTable
eig2x2(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils: An eigen decomposition that uses a deterministic method if the matrix is 2x2.
eigenvalues - Variable in class org.openimaj.math.matrix.algorithm.LinearDiscriminantAnalysis
eigenvalues - Variable in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis
EigenValueVectorPair - Class in org.openimaj.math.matrix: A pair of Eigen values and corresponding vectors
EigenValueVectorPair(Matrix, Matrix) - Constructor for class org.openimaj.math.matrix.EigenValueVectorPair: Construct with Eigen values and vectors.
eigenvectors - Variable in class org.openimaj.math.matrix.algorithm.LinearDiscriminantAnalysis
ELI - Static variable in class org.openimaj.math.geometry.shape.util.polygon.VertexType: External left intermediate
Ellipse - Class in org.openimaj.math.geometry.shape: An ellipse shape
Ellipse(double, double, double, double, double) - Constructor for class org.openimaj.math.geometry.shape.Ellipse: Construct with centroid, semi-major and -minor axes, and rotation.
EllipseAreaOfIntersection - Class in org.openimaj.math.geometry.shape: Methods for computing the area of intersection of two ellipses.
EllipseAreaOfIntersection() - Constructor for class org.openimaj.math.geometry.shape.EllipseAreaOfIntersection
ellipseFromCovariance(float, float, Matrix, float) - Static method in class org.openimaj.math.geometry.shape.EllipseUtilities: Construct ellipse from covariance matrix, scale-factor and centroid.
ellipseFromEquation(double, double, double, double, double) - Static method in class org.openimaj.math.geometry.shape.EllipseUtilities: Construct an ellipse using a parametric ellipse equation, namely: X(t) = centerX + major * cos(t) * cos(rotation) - minor * sin(t) * sin(rotation) Y(t) = centerY + major * cos(t) * cos(rotation) + minor * sin(t) * sin(rotation)
ellipseFromGaussian(MultivariateGaussian, float) - Static method in class org.openimaj.math.geometry.shape.EllipseUtilities: Construct an ellipse that encompasses the shape of a CachingMultivariateGaussian.
ellipseFromSecondMoments(float, float, Matrix) - Static method in class org.openimaj.math.geometry.shape.EllipseUtilities: Construct ellipse from second moment matrix and centroid.
ellipseFromSecondMoments(float, float, Matrix, double) - Static method in class org.openimaj.math.geometry.shape.EllipseUtilities: Construct ellipse from second moment matrix, scale-factor and centroid.
ellipseToCovariance(Ellipse) - Static method in class org.openimaj.math.geometry.shape.EllipseUtilities: Create the covariance matrix of an ellipse.
EllipseUtilities - Class in org.openimaj.math.geometry.shape: An elliptical shape
EllipseUtilities() - Constructor for class org.openimaj.math.geometry.shape.EllipseUtilities
EllipsoidConstraint(double) - Constructor for class org.openimaj.math.geometry.shape.PointDistributionModel.EllipsoidConstraint: Construct with the given maximum normalised ellipsoid radius.
EMM - Static variable in class org.openimaj.math.geometry.shape.util.polygon.VertexType: External maximum and minimum
EMN - Static variable in class org.openimaj.math.geometry.shape.util.polygon.VertexType: External minimum
EMX - Static variable in class org.openimaj.math.geometry.shape.util.polygon.VertexType: External maximum
end - Variable in class org.openimaj.math.geometry.line.Line2d: End point of line
end() - Method in class org.openimaj.math.geometry.line.Line2d
end() - Method in interface org.openimaj.math.geometry.path.Path2d: Get the end of the path
end() - Method in class org.openimaj.math.geometry.path.Polyline
end - Variable in class org.openimaj.math.geometry.shape.algorithm.ConvexityDefect: The ending point on the convex hull
EnergyThresholdComponentSelector(double) - Constructor for class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis.EnergyThresholdComponentSelector: Construct with the given threshold
EpipolarResidual() - Constructor for class org.openimaj.math.geometry.transforms.FundamentalModel.EpipolarResidual
eps - Variable in class org.openimaj.math.matrix.algorithm.whitening.PCAWhitening
equals(Object) - Method in class org.openimaj.math.geometry.line.Line2d
equals(Object) - Method in class org.openimaj.math.geometry.point.AbstractPoint2d
equals(Object) - Method in class org.openimaj.math.geometry.point.Point2dImpl
equals(Object) - Method in class org.openimaj.math.geometry.point.Point3dImpl
equals(Object) - Method in class org.openimaj.math.geometry.shape.Circle
equals(Object) - Method in class org.openimaj.math.geometry.shape.Ellipse
equals(Object) - Method in class org.openimaj.math.geometry.shape.Polygon
equals(Polygon) - Method in class org.openimaj.math.geometry.shape.Polygon: Specific equals method for polygons where the polgyons are tested for the vertices being in the same order.
equals(Object) - Method in class org.openimaj.math.geometry.shape.Rectangle
equals(Object) - Method in class org.openimaj.math.geometry.shape.Triangle
equals(Matrix, Matrix, double) - Static method in class org.openimaj.math.matrix.MatrixUtils: Check if two matrices are equal
ERI - Static variable in class org.openimaj.math.geometry.shape.util.polygon.VertexType: External right intermediate
errorModel - Variable in class org.openimaj.math.model.fit.RANSAC
EstimatableModel<I,D> - Interface in org.openimaj.math.model: An extension to a Model that allows the model to be estimated from a series of observations of both the independent and dependent variables.
estimate(List<? extends IndependentPair<Point2d, Point2d>>) - Method in class org.openimaj.math.geometry.transforms.AffineTransformModel
estimate(List<? extends IndependentPair<Point3d, Point3d>>) - Method in class org.openimaj.math.geometry.transforms.AffineTransformModel3d
estimate(List<? extends IndependentPair<Point2d, Point2d>>) - Method in class org.openimaj.math.geometry.transforms.FundamentalModel
estimate(List<? extends IndependentPair<Point2d, Point2d>>) - Method in class org.openimaj.math.geometry.transforms.HomographyModel: DLT estimation of least-squares solution of 3D homogeneous homography
estimate(List<? extends IndependentPair<T, T>>) - Method in class org.openimaj.math.geometry.transforms.NullModel
estimate(List<? extends IndependentPair<Point3d, Point3d>>) - Method in class org.openimaj.math.geometry.transforms.RigidTransformModel3d
estimate(List<? extends IndependentPair<I, D>>) - Method in interface org.openimaj.math.model.EstimatableModel: Estimates the model from the observations in the list of data.
estimate(List<? extends IndependentPair<double[], T>>) - Method in class org.openimaj.math.model.GaussianVectorNaiveBayesModel
estimate(List<? extends IndependentPair<Integer, Integer>>) - Method in class org.openimaj.math.model.LeastSquaresLinearModel: Using standard vertical linear regression as outlined here: http://mathworld.wolfram.com/LeastSquaresFitting.html calculate the m and c of a line of best fit given the data.
estimate(List<? extends IndependentPair<Double, T>>) - Method in class org.openimaj.math.model.UnivariateGaussianNaiveBayesModel
estimate(float[][]) - Static method in class org.openimaj.math.statistics.distribution.CachingMultivariateGaussian: Estimate a multidimensional Gaussian from the data
estimate(Matrix) - Static method in class org.openimaj.math.statistics.distribution.CachingMultivariateGaussian: Estimate a multidimensional Gaussian from the data
estimate(double[][]) - Static method in class org.openimaj.math.statistics.distribution.CachingMultivariateGaussian: Estimate a multidimensional Gaussian from the data
estimateLogProbability(double[]) - Method in class org.openimaj.math.statistics.distribution.AbstractMultivariateDistribution
estimateLogProbability(double[]) - Method in class org.openimaj.math.statistics.distribution.AbstractMultivariateGaussian
estimateLogProbability(double[][]) - Method in class org.openimaj.math.statistics.distribution.AbstractMultivariateGaussian
estimateLogProbability(double[]) - Method in class org.openimaj.math.statistics.distribution.CachingMultivariateGaussian
estimateLogProbability(double[]) - Method in class org.openimaj.math.statistics.distribution.DiagonalMultivariateGaussian
estimateLogProbability(double[][]) - Method in class org.openimaj.math.statistics.distribution.DiagonalMultivariateGaussian
estimateLogProbability(double[]) - Method in class org.openimaj.math.statistics.distribution.MixtureOfGaussians
estimateLogProbability(double[][]) - Method in class org.openimaj.math.statistics.distribution.MixtureOfGaussians: Get the probability for a given points in space relative to the PDF represented by the gaussian mixture.
estimateLogProbability(double[]) - Method in interface org.openimaj.math.statistics.distribution.MultivariateDistribution: Get the log probability for a given point in space relative to the PDF represented by this distribution.
estimateLogProbability(double[][]) - Method in interface org.openimaj.math.statistics.distribution.MultivariateDistribution: Get the log probability for a given point in space relative to the PDF represented by this distribution.
estimateLogProbability(double[][]) - Method in class org.openimaj.math.statistics.distribution.MultivariateKernelDensityEstimate
estimateProbability(double[]) - Method in class org.openimaj.math.statistics.distribution.AbstractMultivariateGaussian
estimateProbability(double[]) - Method in class org.openimaj.math.statistics.distribution.CachingMultivariateGaussian: Get the probability for a given point in space relative to the PDF represented by this Gaussian.
estimateProbability(Float[]) - Method in class org.openimaj.math.statistics.distribution.CachingMultivariateGaussian: Get the probability for a given point in space relative to the PDF represented by this Gaussian.
estimateProbability(double[]) - Method in class org.openimaj.math.statistics.distribution.DiagonalMultivariateGaussian
estimateProbability(double[]) - Method in class org.openimaj.math.statistics.distribution.MixtureOfGaussians
estimateProbability(double[]) - Method in interface org.openimaj.math.statistics.distribution.MultivariateDistribution: Get the probability for a given point in space relative to the PDF represented by this distribution.
estimateProbability(double[]) - Method in class org.openimaj.math.statistics.distribution.MultivariateKernelDensityEstimate
evaluate(double) - Method in interface org.openimaj.math.statistics.distribution.kernel.UnivariateKernel: Evaluate the kernel at the given value
execute() - Method in class org.openimaj.math.combinatorics.optimisation.HungarianAlgorithm: Execute the algorithm.
executePhase() - Method in class org.openimaj.math.combinatorics.optimisation.HungarianAlgorithm: Execute a single phase of the algorithm.
exp(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils: Return a copy of the input matrix where every value is the exponential of the elements, e to the X.
exponent - Variable in class org.openimaj.math.util.MathUtils.ExponentAndMantissa: The exponent
ExponentAndMantissa() - Constructor for class org.openimaj.math.util.MathUtils.ExponentAndMantissa

F

F12Epipolar(List<? extends IndependentPair<? extends Point2d, ? extends Point2d>>) - Constructor for class org.openimaj.math.geometry.transforms.FundamentalRefinement.F12Epipolar
F12Sampson(List<? extends IndependentPair<? extends Point2d, ? extends Point2d>>) - Constructor for class org.openimaj.math.geometry.transforms.FundamentalRefinement.F12Sampson
F13Epipolar(List<? extends IndependentPair<? extends Point2d, ? extends Point2d>>) - Constructor for class org.openimaj.math.geometry.transforms.FundamentalRefinement.F13Epipolar
F13Sampson(List<? extends IndependentPair<? extends Point2d, ? extends Point2d>>) - Constructor for class org.openimaj.math.geometry.transforms.FundamentalRefinement.F13Sampson
F23Epipolar(List<? extends IndependentPair<? extends Point2d, ? extends Point2d>>) - Constructor for class org.openimaj.math.geometry.transforms.FundamentalRefinement.F23Epipolar
F23Sampson(List<? extends IndependentPair<? extends Point2d, ? extends Point2d>>) - Constructor for class org.openimaj.math.geometry.transforms.FundamentalRefinement.F23Sampson
factor(DenseMatrix) - Method in class no.uib.cipr.matrix.EconomySVD: Computes an SVD
factorize(Matrix) - Static method in class no.uib.cipr.matrix.EconomySVD: Convenience method for computing a full SVD
fastdot(Matrix, Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils
fastminus(Matrix, Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils
fastminusEquals(Matrix, Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils
fastsetcol(Matrix, int, Vector) - Static method in class org.openimaj.math.matrix.CFMatrixUtils
FastSolveNormal3x2() - Constructor for class org.openimaj.math.geometry.transforms.FundamentalRefinement.FastSolveNormal3x2
fastsparsedot(SparseRowMatrix, SparseColumnMatrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils
fastsparseminusEquals(SparseColumnMatrix, SparseColumnMatrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils
fastsparseminusEquals(SparseRowMatrix, SparseRowMatrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils
fetchUnmatchedWorker() - Method in class org.openimaj.math.combinatorics.optimisation.HungarianAlgorithm
fill(int, double) - Static method in class org.openimaj.math.matrix.DiagonalMatrix
fill(double) - Method in class org.openimaj.math.matrix.JamaDenseMatrix: Fill the elements with a constant value.
fill(Matrix, double) - Static method in class org.openimaj.math.matrix.MatrixUtils: Fill a matrix with a constant value.
finalFitCondition(int) - Method in class org.openimaj.math.model.fit.RANSAC.BestFitStoppingCondition
finalFitCondition(int) - Method in class org.openimaj.math.model.fit.RANSAC.NumberInliersStoppingCondition
finalFitCondition(int) - Method in class org.openimaj.math.model.fit.RANSAC.ProbabilisticMinInliersStoppingCondition
finalFitCondition(int) - Method in interface org.openimaj.math.model.fit.RANSAC.StoppingCondition: Should the model be considered to fit after the final iteration has passed?
findDefects(Polygon) - Static method in class org.openimaj.math.geometry.shape.algorithm.ConvexityDefect: Find the defects of the given polygon.
findDefects(Polygon, Polygon) - Static method in class org.openimaj.math.geometry.shape.algorithm.ConvexityDefect: Find the defects of the given polygon, based on the given convex hull
first_bound - Variable in class org.openimaj.math.geometry.shape.util.polygon.LmtNode: Pointer to bound list
firstVertex() - Method in class org.openimaj.math.geometry.shape.Triangle
fitData(List<? extends IndependentPair<Point2d, Point2d>>) - Method in class org.openimaj.math.geometry.transforms.estimation.RobustAffineTransformEstimator
fitData(List<? extends IndependentPair<Point2d, Point2d>>) - Method in class org.openimaj.math.geometry.transforms.estimation.RobustFundamentalEstimator
fitData(List<? extends IndependentPair<Point2d, Point2d>>) - Method in class org.openimaj.math.geometry.transforms.estimation.RobustHomographyEstimator
fitData(List<? extends IndependentPair<I, D>>) - Method in class org.openimaj.math.model.fit.LMedS
fitData(List<? extends IndependentPair<I, D>>) - Method in interface org.openimaj.math.model.fit.ModelFitting: Attempt to fit the given data to the model.
fitData(List<? extends IndependentPair<I, D>>) - Method in class org.openimaj.math.model.fit.RANSAC
fitData(List<? extends IndependentPair<I, D>>) - Method in class org.openimaj.math.model.fit.SimpleModelFitting
fitModel(PointList) - Method in class org.openimaj.math.geometry.shape.PointDistributionModel: Determine the best parameters of the PDM for the given model.
FloatArrayStatsUtils - Class in org.openimaj.math.util: Some basic statistical operations on float arrays
FloatArrayStatsUtils() - Constructor for class org.openimaj.math.util.FloatArrayStatsUtils
frexp(double) - Static method in class org.openimaj.math.util.MathUtils: Implementation of the C frexp function to break floating-point number into normalized fraction and power of 2.
from - Variable in class org.openimaj.math.graph.SimpleEdge: First vertex
fromCF(Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils: Create a Matrix from the Cognitive Foundry equivalent
fromDoubleArray(double[]) - Static method in class org.openimaj.math.geometry.point.Point2dImpl
fromJama(Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
fromMatlab(MLArray) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils: Create a Matrix from a matlab MLArray
fromRowPacked(double[], int) - Static method in class org.openimaj.math.matrix.MatrixUtils: Construct a matrix from a row-packed (i.e.
fromTransformMatrix2x2(Matrix, float, float, float) - Static method in class org.openimaj.math.geometry.shape.EllipseUtilities: Create an ellipse.
FUL - Static variable in class org.openimaj.math.geometry.shape.util.polygon.VertexType: Full non-intersection
FullMultivariateGaussian - Class in org.openimaj.math.statistics.distribution: Implementation of a basic MultivariateGaussian with a full covariance matrix.
FullMultivariateGaussian(Matrix, Matrix) - Constructor for class org.openimaj.math.statistics.distribution.FullMultivariateGaussian: Construct the Gaussian with the provided center and covariance
FullMultivariateGaussian(int) - Constructor for class org.openimaj.math.statistics.distribution.FullMultivariateGaussian: Construct the Gaussian with the zero mean and unit variance
fundamental - Variable in class org.openimaj.math.geometry.transforms.FundamentalModel
Fundamental8PtResidual() - Constructor for class org.openimaj.math.geometry.transforms.FundamentalModel.Fundamental8PtResidual
fundamentalMatrix8Pt(List<? extends IndependentPair<Point2d, Point2d>>) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities: The un-normalised 8-point algorithm for estimation of the Fundamental matrix.
fundamentalMatrix8PtNorm(List<? extends IndependentPair<Point2d, Point2d>>) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities: The normalised 8-point algorithm for estimating the Fundamental matrix
FundamentalModel - Class in org.openimaj.math.geometry.transforms: Implementation of a Fundamental matrix model that estimates the epipolar geometry.
FundamentalModel() - Constructor for class org.openimaj.math.geometry.transforms.FundamentalModel: Create a FundamentalModel, automatically normalising data when estimating the model
FundamentalModel(boolean) - Constructor for class org.openimaj.math.geometry.transforms.FundamentalModel: Create a FundamentalModel with optional automatic normalisation.
FundamentalModel.EpipolarResidual - Class in org.openimaj.math.geometry.transforms: Geometric residual that sums the distance of points from the closest epipolar line.
FundamentalModel.Fundamental8PtResidual - Class in org.openimaj.math.geometry.transforms: Computes the algebraic residual of the point pairs applied to the F matrix
FundamentalModel.SampsonGeometricResidual - Class in org.openimaj.math.geometry.transforms: ResidualCalculator based on Sampson's geometric error.
FundamentalRefinement - Enum in org.openimaj.math.geometry.transforms: Refinement of fundamental matrix estimates using non-linear optimisation (Levenberg-Marquardt) under different geometric distance/error assumptions.
FundamentalRefinement.Base - Class in org.openimaj.math.geometry.transforms
FundamentalRefinement.F12Epipolar - Class in org.openimaj.math.geometry.transforms: Based on the following matlab:
FundamentalRefinement.F12Sampson - Class in org.openimaj.math.geometry.transforms: Based on the following matlab:
FundamentalRefinement.F13Epipolar - Class in org.openimaj.math.geometry.transforms: Based on the following matlab:
FundamentalRefinement.F13Sampson - Class in org.openimaj.math.geometry.transforms: Based on the following matlab:
FundamentalRefinement.F23Epipolar - Class in org.openimaj.math.geometry.transforms: Based on the following matlab:
FundamentalRefinement.F23Sampson - Class in org.openimaj.math.geometry.transforms: Based on the following matlab:
FundamentalRefinement.FastSolveNormal3x2 - Class in org.openimaj.math.geometry.transforms
FundamentalRefinement.Parameterisation - Enum in org.openimaj.math.geometry.transforms: Parameterisations of the fundamental matrix that preserve the rank-2 constraint by writing one of the rows as a weighted combination of the other two.
FWD_MIN(int) - Method in class org.openimaj.math.geometry.shape.util.polygon.EdgeTable





G

GaussianKLDivergence - Class in org.openimaj.math.statistics.distribution.metrics

Calculate the KL divergence of two multivariate gaussians.

GaussianKLDivergence() - Constructor for class org.openimaj.math.statistics.distribution.metrics.GaussianKLDivergence
 
gaussians - Variable in class org.openimaj.math.statistics.distribution.MixtureOfGaussians

The individual gaussians

GaussianVectorNaiveBayesModel<T> - Class in org.openimaj.math.model

An implementation of a EstimatableModel that uses a
 VectorNaiveBayesCategorizer to associate vectors (actually double[])
 with a category based on the naive bayes model.

GaussianVectorNaiveBayesModel() - Constructor for class org.openimaj.math.model.GaussianVectorNaiveBayesModel
 
GeneralisedEigenvalueProblem - Class in org.openimaj.math.matrix

Methods for solving the Generalised Eigenvalue Problem: A x = L B x.

GeneralisedEigenvalueProblem() - Constructor for class org.openimaj.math.matrix.GeneralisedEigenvalueProblem
 
GeneralisedProcrustesAnalysis - Class in org.openimaj.math.geometry.shape.algorithm

Implementation of shape alignment using Generalised Procrustes Analysis.

GeneralisedProcrustesAnalysis(float, int) - Constructor for class org.openimaj.math.geometry.shape.algorithm.GeneralisedProcrustesAnalysis

Construct the GeneralisedProcrustesAnalysis with the given
 parameters.

GeneralisedProcrustesAnalysis(float) - Constructor for class org.openimaj.math.geometry.shape.algorithm.GeneralisedProcrustesAnalysis

Construct the GeneralisedProcrustesAnalysis with the given
 parameters.

generate(double[]) - Method in class org.openimaj.math.matrix.algorithm.LinearDiscriminantAnalysis

Generate a new "observation" as a linear combination of
 the eigenvectors (ev): mean + ev * scaling.

generate(double[]) - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis

Generate a new "observation" as a linear combination of the principal
 components (PC): mean + PC * scaling.

generateNewShape(double[]) - Method in class org.openimaj.math.geometry.shape.PointDistributionModel

Generate a plausible new shape from the scaling vector.

GeometricObject2d - Interface in org.openimaj.math.geometry

A generalised 2D geometric object that has a calculable centre of gravity and
 regular bounding box.

get(int) - Method in class org.openimaj.math.geometry.point.PointList

Get the ith point

get(int, int) - Method in class org.openimaj.math.matrix.DiagonalMatrix
 
get(int, int) - Method in class org.openimaj.math.matrix.JamaDenseMatrix
 
getBandwidth() - Method in class org.openimaj.math.statistics.distribution.MultivariateKernelDensityEstimate

Get the bandwidth

getBasis() - Method in class org.openimaj.math.matrix.algorithm.LinearDiscriminantAnalysis

Get the basis (the LDA eigenvectors)

getBasis() - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis

Get the principal components.

getBasisVector(int) - Method in class org.openimaj.math.matrix.algorithm.LinearDiscriminantAnalysis

Get a specific basis vector as
 a double array.

getBeginPoint() - Method in class org.openimaj.math.geometry.line.Line2d

Get the start point

getBottomRight() - Method in class org.openimaj.math.geometry.shape.Rectangle
 
getC() - Method in class org.openimaj.math.model.LeastSquaresLinearModel

Get the offset (c in y=mx+c)

getClassDistribution(T) - Method in class org.openimaj.math.model.UnivariateGaussianNaiveBayesModel

Get the class distribution for the given class.

getClassDistribution() - Method in class org.openimaj.math.model.UnivariateGaussianNaiveBayesModel

Get the class distribution for all classes.

getClassPriors() - Method in class org.openimaj.math.model.UnivariateGaussianNaiveBayesModel
 
getConnections(Point2d, PointList) - Method in class org.openimaj.math.geometry.point.PointListConnections

Get the points connected to the given point.

getConnections(int) - Method in class org.openimaj.math.geometry.point.PointListConnections

Get the indices of all the points connected to the point with the given
 index.

getConvexHull(List<Point2d>) - Static method in class org.openimaj.math.geometry.shape.util.GrahamScan

Returns the convex hull of the Point2ds created from the list
 Point2ds.

getCovariance() - Method in class org.openimaj.math.statistics.distribution.CachingMultivariateGaussian
 
getCovariance(int, int) - Method in class org.openimaj.math.statistics.distribution.CachingMultivariateGaussian
 
getCovariance() - Method in class org.openimaj.math.statistics.distribution.DiagonalMultivariateGaussian
 
getCovariance(int, int) - Method in class org.openimaj.math.statistics.distribution.DiagonalMultivariateGaussian
 
getCovariance() - Method in class org.openimaj.math.statistics.distribution.FullMultivariateGaussian
 
getCovariance(int, int) - Method in class org.openimaj.math.statistics.distribution.FullMultivariateGaussian
 
getCovariance() - Method in interface org.openimaj.math.statistics.distribution.MultivariateGaussian

Get the covariance

getCovariance(int, int) - Method in interface org.openimaj.math.statistics.distribution.MultivariateGaussian

Get a covariance value from the covariance matrix.

getCovariance() - Method in class org.openimaj.math.statistics.distribution.SphericalMultivariateGaussian
 
getCovariance(int, int) - Method in class org.openimaj.math.statistics.distribution.SphericalMultivariateGaussian
 
getCovariance() - Method in class org.openimaj.math.statistics.MeanAndCovariance

Get the covariance matrix

getCumulativeEnergies() - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis

Get the cumulative energies of each principal component

getCumulativeEnergy(int) - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis

Get the cumulative energy of the ith principal component

getCutOff() - Method in interface org.openimaj.math.statistics.distribution.kernel.UnivariateKernel

Get the absolute value at which the kernel's response is essentially
 zero.

getData(Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils

Get the data array backing this matrix (in column-major format)

getData() - Method in class org.openimaj.math.statistics.distribution.MultivariateKernelDensityEstimate

Get the underlying data

getDensestSubgraph() - Method in class org.openimaj.math.graph.algorithm.CharikarDensestSubgraph
 
getDimensions() - Method in class org.openimaj.math.geometry.point.AbstractPoint2d
 
getDimensions() - Method in interface org.openimaj.math.geometry.point.Coordinate
 
getDimensions() - Method in class org.openimaj.math.geometry.point.PayloadCoordinate
 
getDimensions() - Method in class org.openimaj.math.geometry.point.Point2dImpl
 
getDimensions() - Method in class org.openimaj.math.geometry.point.Point3dImpl
 
getEdges() - Method in class org.openimaj.math.geometry.shape.Triangle
 
getEigenValue(int) - Method in class org.openimaj.math.matrix.algorithm.LinearDiscriminantAnalysis

Get the eigen value corresponding to the ith principal component.

getEigenValue(int) - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis

Get the eigen value corresponding to the ith principal component.

getEigenValues() - Method in class org.openimaj.math.matrix.algorithm.LinearDiscriminantAnalysis
 
getEigenValues() - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis
 
getEigenVectors() - Method in class org.openimaj.math.matrix.algorithm.LinearDiscriminantAnalysis

Get the basis eigenvectors.

getEigenVectors() - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis

Get the principal components.

getEndPoint() - Method in class org.openimaj.math.geometry.line.Line2d

Get the end point

getF() - Method in class org.openimaj.math.geometry.transforms.FundamentalModel

Get the fundamental matrix

getFunctions(List<? extends IndependentPair<? extends Point2d, ? extends Point2d>>, FundamentalRefinement.Parameterisation) - Method in enum org.openimaj.math.geometry.transforms.FundamentalRefinement
 
getGaussians() - Method in class org.openimaj.math.statistics.distribution.MixtureOfGaussians

Get the gaussians that make up the mixture

getHeight() - Method in interface org.openimaj.math.geometry.GeometricObject2d
 
getHeight() - Method in class org.openimaj.math.geometry.line.Line2d
 
getHeight() - Method in class org.openimaj.math.geometry.point.PointList
 
getHeight() - Method in class org.openimaj.math.geometry.shape.Circle
 
getHeight() - Method in class org.openimaj.math.geometry.shape.Ellipse
 
getHeight() - Method in class org.openimaj.math.geometry.shape.Rectangle
 
getHeight() - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
 
getHeight() - Method in class org.openimaj.math.geometry.shape.Triangle
 
getIM() - Method in class org.openimaj.math.util.Complex

Return the imaginary part.

getIndex(Polygon, RotatingCalipers.Corner) - Static method in class org.openimaj.math.geometry.shape.util.RotatingCalipers
 
getIndex() - Method in class org.openimaj.math.matrix.similarity.SimilarityMatrix

Get the index

getIndexValue(int) - Method in class org.openimaj.math.matrix.similarity.SimilarityMatrix

Get a value from the index

getInliers() - Method in class org.openimaj.math.geometry.transforms.estimation.RobustAffineTransformEstimator
 
getInliers() - Method in class org.openimaj.math.geometry.transforms.estimation.RobustFundamentalEstimator
 
getInliers() - Method in class org.openimaj.math.geometry.transforms.estimation.RobustHomographyEstimator
 
getInliers() - Method in class org.openimaj.math.model.fit.LMedS
 
getInliers() - Method in class org.openimaj.math.model.fit.RANSAC
 
getInliers() - Method in interface org.openimaj.math.model.fit.RobustModelFitting
 
getInliers() - Method in class org.openimaj.math.model.fit.SimpleModelFitting
 
getInnerPoly(int) - Method in class org.openimaj.math.geometry.shape.Polygon

Get the inner polygon at the given index.

getInnerPolys() - Method in class org.openimaj.math.geometry.shape.Polygon

Returns the list of inner polygons.

getIntersection(Line2d) - Method in class org.openimaj.math.geometry.line.Line2d

Calculates the intersection point of this line and another line

getJacobianFunction(List<? extends IndependentPair<? extends Point2d, ? extends Point2d>>) - Method in enum org.openimaj.math.geometry.transforms.HomographyRefinement
 
getLines() - Method in class org.openimaj.math.geometry.point.PointList
 
getLines(PointListConnections) - Method in class org.openimaj.math.geometry.point.PointList
 
getLines(PointList) - Method in class org.openimaj.math.geometry.point.PointListConnections

Get the connections as a list of lines based on the points in the given
 PointList.

getLowestPoint2d(List<Point2d>) - Static method in class org.openimaj.math.geometry.shape.util.GrahamScan

Returns the Point2ds with the lowest y coordinate.

getM() - Method in class org.openimaj.math.model.LeastSquaresLinearModel

Get the gradient (m in y=mx+c)

getMagnitude() - Method in class org.openimaj.math.util.Complex

Return the magnitude of this complex number.

getMajor() - Method in class org.openimaj.math.geometry.shape.Ellipse
 
getMatrix() - Method in class org.openimaj.math.matrix.JamaDenseMatrix
 
getMaxIterations() - Method in class org.openimaj.math.model.fit.RANSAC
 
getMean() - Method in class org.openimaj.math.geometry.shape.PointDistributionModel
 
getMean() - Method in class org.openimaj.math.matrix.algorithm.LinearDiscriminantAnalysis
 
getMean() - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis
 
getMean() - Method in class org.openimaj.math.statistics.distribution.AbstractMultivariateGaussian
 
getMean() - Method in interface org.openimaj.math.statistics.distribution.MultivariateGaussian

Get the mean

getMean() - Method in class org.openimaj.math.statistics.MeanAndCovariance

Get the mean vector

getMinDegreeVertex(UndirectedGraph<V, E>) - Method in class org.openimaj.math.graph.algorithm.CharikarDensestSubgraph
 
getMinDegreeVertexBruteForce(UndirectedGraph<V, E>) - Method in class org.openimaj.math.graph.algorithm.CharikarDensestSubgraph
 
getMinimumBoundingRectangle(Polygon, boolean) - Static method in class org.openimaj.math.geometry.shape.util.RotatingCalipers

Use the rotating calipers algorithm to optimally find the minimum sized
 rotated rectangle that encompasses the outer shell of the given polygon.

getMinor() - Method in class org.openimaj.math.geometry.shape.Ellipse
 
getModel() - Method in class org.openimaj.math.geometry.transforms.estimation.RobustAffineTransformEstimator
 
getModel() - Method in class org.openimaj.math.geometry.transforms.estimation.RobustFundamentalEstimator
 
getModel() - Method in class org.openimaj.math.geometry.transforms.estimation.RobustHomographyEstimator
 
getModel() - Method in class org.openimaj.math.model.fit.LMedS
 
getModel() - Method in interface org.openimaj.math.model.fit.ModelFitting
 
getModel() - Method in class org.openimaj.math.model.fit.RANSAC
 
getModel() - Method in class org.openimaj.math.model.fit.SimpleModelFitting
 
getModel() - Method in class org.openimaj.math.util.distance.ModelDistanceCheck
 
getModelConstructionData() - Method in class org.openimaj.math.model.fit.RANSAC
 
getNode(int) - Method in class org.openimaj.math.geometry.shape.util.polygon.EdgeTable
 
getNormal() - Method in class org.openimaj.math.geometry.line.Line2d

Returns a line that is at 90 degrees to the original line.

getNormal(Point2d) - Method in class org.openimaj.math.geometry.line.Line2d

Returns a line that is at 90 degrees to the original line and also passes
 through the given point.

getNormalisations(List<? extends IndependentPair<? extends Point2d, ? extends Point2d>>) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities

Generates the data for normalisation of the points such that each matched
 point is centered about the origin and also scaled be be within
 Math.sqrt(2) of the origin.

getNumInnerPoly() - Method in class org.openimaj.math.geometry.shape.Polygon

Returns the number of inner polygons in this polygon including this
 polygon.

getOrdinate(int) - Method in interface org.openimaj.math.geometry.point.Coordinate

Get the ordinate value for a specific dimension.

getOrdinate(int) - Method in class org.openimaj.math.geometry.point.PayloadCoordinate
 
getOrdinate(int) - Method in class org.openimaj.math.geometry.point.Point2dImpl
 
getOrdinate(int) - Method in class org.openimaj.math.geometry.point.Point3dImpl
 
getOutliers() - Method in class org.openimaj.math.geometry.transforms.estimation.RobustAffineTransformEstimator
 
getOutliers() - Method in class org.openimaj.math.geometry.transforms.estimation.RobustFundamentalEstimator
 
getOutliers() - Method in class org.openimaj.math.geometry.transforms.estimation.RobustHomographyEstimator
 
getOutliers() - Method in class org.openimaj.math.model.fit.LMedS
 
getOutliers() - Method in class org.openimaj.math.model.fit.RANSAC
 
getOutliers() - Method in interface org.openimaj.math.model.fit.RobustModelFitting
 
getOutliers() - Method in class org.openimaj.math.model.fit.SimpleModelFitting
 
getPayload() - Method in class org.openimaj.math.geometry.point.PayloadCoordinate
 
getPoint(String) - Method in class org.openimaj.math.matrix.similarity.processor.MultidimensionalScaling

Get the predicted point for a specific element.

getPoints() - Method in class org.openimaj.math.matrix.similarity.processor.MultidimensionalScaling

Get a list of the 2-D coordinates learned by the MDS algorithm for each
 element in the input similarity matrix.

getPrincipalComponent(int) - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis

Get a specific principle component vector as a double array.

getRadius() - Method in class org.openimaj.math.geometry.shape.Circle
 
getRE() - Method in class org.openimaj.math.util.Complex

Return the real part.

getResult(Class<Polygon>) - Method in class org.openimaj.math.geometry.shape.util.polygon.TopPolygonNode
 
getRotation() - Method in class org.openimaj.math.geometry.shape.Ellipse
 
getS() - Method in class no.uib.cipr.matrix.EconomySVD

Returns the singular values (stored in descending order)

getScaledBandwidth() - Method in class org.openimaj.math.statistics.distribution.MultivariateKernelDensityEstimate

Get the bandwidth scaled by the kernel support.

getSmatrix() - Method in class org.openimaj.math.matrix.ThinSingularValueDecomposition
 
getSmatrixSqrt() - Method in class org.openimaj.math.matrix.ThinSingularValueDecomposition
 
getSortedPoint2dSet(List<Point2d>) - Static method in class org.openimaj.math.geometry.shape.util.GrahamScan

Returns a sorted set of Point2ds from the list Point2ds.

getStandardDeviations(double) - Method in class org.openimaj.math.geometry.shape.PointDistributionModel

Compute the standard deviations of the shape components, multiplied by
 the given value.

getStandardDeviations() - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis

Get the standard deviations (sqrt of eigenvalues) of the principal
 components.

getStandardDeviations(int) - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis

Get the standard deviations (sqrt of eigenvalues) of the n top principal
 components.

getSupport(double[]) - Method in class org.openimaj.math.statistics.distribution.MultivariateKernelDensityEstimate

Get the underlying points that support the KDE within the window around
 the given point.

getTopLeft() - Method in class org.openimaj.math.geometry.shape.Rectangle
 
getTransform() - Method in class org.openimaj.math.geometry.transforms.AffineTransformModel
 
getTransform() - Method in class org.openimaj.math.geometry.transforms.AffineTransformModel3d
 
getTransform() - Method in class org.openimaj.math.geometry.transforms.HomographyModel
 
getTransform() - Method in interface org.openimaj.math.geometry.transforms.MatrixTransformProvider
 
getTransform() - Method in class org.openimaj.math.matrix.algorithm.whitening.PCAWhitening

Get the underlying whitening transform matrix.

getTriangle() - Method in class org.openimaj.math.geometry.shape.algorithm.ConvexityDefect

Get the triangle represented by this defect.

getTurn(Point2d, Point2d, Point2d) - Static method in class org.openimaj.math.geometry.shape.util.GrahamScan

Returns the GrahamScan#Turn formed by traversing through the ordered
 Point2ds a, b and c.

getType(int, int, int, int) - Static method in class org.openimaj.math.geometry.shape.util.polygon.VertexType
 
getU() - Method in class no.uib.cipr.matrix.EconomySVD

Returns the left singular vectors, column-wise.

getVals() - Method in class org.openimaj.math.matrix.DiagonalMatrix
 
getValueFunction(List<? extends IndependentPair<? extends Point2d, ? extends Point2d>>) - Method in enum org.openimaj.math.geometry.transforms.HomographyRefinement
 
getValues() - Method in class org.openimaj.math.matrix.EigenValueVectorPair
 
getVectors() - Method in class org.openimaj.math.matrix.EigenValueVectorPair
 
getVertices() - Method in class org.openimaj.math.geometry.shape.Polygon

Get the vertices of the polygon

getVt() - Method in class no.uib.cipr.matrix.EconomySVD

Returns the right singular vectors, row-wise.

getWeights() - Method in class org.openimaj.math.statistics.distribution.MixtureOfGaussians

Get the mixture weights for each gaussian.

getWidth() - Method in interface org.openimaj.math.geometry.GeometricObject2d
 
getWidth() - Method in class org.openimaj.math.geometry.line.Line2d
 
getWidth() - Method in class org.openimaj.math.geometry.point.PointList
 
getWidth() - Method in class org.openimaj.math.geometry.shape.Circle
 
getWidth() - Method in class org.openimaj.math.geometry.shape.Ellipse
 
getWidth() - Method in class org.openimaj.math.geometry.shape.Rectangle
 
getWidth() - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
 
getWidth() - Method in class org.openimaj.math.geometry.shape.Triangle
 
getX() - Method in class org.openimaj.math.geometry.point.AbstractPoint2d
 
getX() - Method in interface org.openimaj.math.geometry.point.Point2d
 
getX() - Method in class org.openimaj.math.geometry.point.Point2dImpl
 
getX() - Method in interface org.openimaj.math.geometry.point.Point3d
 
getX() - Method in class org.openimaj.math.geometry.point.Point3dImpl
 
getX() - Method in class org.openimaj.math.geometry.shape.Circle
 
getY() - Method in class org.openimaj.math.geometry.point.AbstractPoint2d
 
getY() - Method in interface org.openimaj.math.geometry.point.Point2d
 
getY() - Method in class org.openimaj.math.geometry.point.Point2dImpl
 
getY() - Method in interface org.openimaj.math.geometry.point.Point3d
 
getY() - Method in class org.openimaj.math.geometry.point.Point3dImpl
 
getY() - Method in class org.openimaj.math.geometry.shape.Circle
 
getZ() - Method in interface org.openimaj.math.geometry.point.Point3d
 
getZ() - Method in class org.openimaj.math.geometry.point.Point3dImpl
 
GPC_DIFF - Static variable in class org.openimaj.math.geometry.shape.util.polygon.OperationType
 
GPC_INT - Static variable in class org.openimaj.math.geometry.shape.util.polygon.OperationType
 
GPC_UNION - Static variable in class org.openimaj.math.geometry.shape.util.polygon.OperationType
 
GPC_XOR - Static variable in class org.openimaj.math.geometry.shape.util.polygon.OperationType
 
GrahamScan - Class in org.openimaj.math.geometry.shape.util

Graham Scan convex hull algorithm, based on the implementation by Bart Kiers.

GrahamScan() - Constructor for class org.openimaj.math.geometry.shape.util.GrahamScan
 
GrahamScan.Turn - Enum in org.openimaj.math.geometry.shape.util

An enum denoting a directional-turn between 3 Point2ds (vectors).

GramSchmidtProcess - Class in org.openimaj.math.matrix

Perform the Gram-Schmid process on a vector, returning the orthogonal basis set 
 whose first vector is the input
 
 http://zintegra.net/archives/738

GramSchmidtProcess() - Constructor for class org.openimaj.math.matrix.GramSchmidtProcess

an unseeded random start

GramSchmidtProcess(int) - Constructor for class org.openimaj.math.matrix.GramSchmidtProcess

Set the random seed of the purtubations

graph - Variable in class org.openimaj.math.graph.algorithm.CharikarDensestSubgraph
 
greaterThan(Matrix, double) - Static method in class org.openimaj.math.matrix.MatrixUtils
 
greaterThanSet(Matrix, int, int) - Static method in class org.openimaj.math.matrix.MatrixUtils

for every value in x greater than val set toset

greedyMatch() - Method in class org.openimaj.math.combinatorics.optimisation.HungarianAlgorithm

Find a valid matching by greedily selecting among zero-cost matchings.





H

HammingUtils - Class in org.openimaj.math.util.distance

Utilities for hamming distance calculations.

HammingUtils() - Constructor for class org.openimaj.math.util.distance.HammingUtils
 
hashCode() - Method in class org.openimaj.math.geometry.line.Line2d
 
hashCode() - Method in class org.openimaj.math.geometry.point.AbstractPoint2d
 
hashCode() - Method in class org.openimaj.math.geometry.point.Point2dImpl
 
hashCode() - Method in class org.openimaj.math.geometry.point.Point3dImpl
 
hashCode() - Method in class org.openimaj.math.geometry.shape.Polygon
hashCode() - Method in class org.openimaj.math.geometry.shape.Rectangle
 
hashCode() - Method in class org.openimaj.math.geometry.shape.Triangle
 
hasNoInnerPolygons() - Method in class org.openimaj.math.geometry.shape.Polygon

Test if this has no inner polygons or sub-parts

heap - Variable in class org.openimaj.math.graph.algorithm.CharikarDensestSubgraph
 
height - Variable in class org.openimaj.math.geometry.shape.Rectangle

The height of the rectangle

height - Variable in class org.openimaj.math.geometry.shape.RotatedRectangle

The height of the rotated rectangle (Note that this is different to the
 height returned by RotatedRectangle.getHeight() which is the height of the
 regular bounding box)

homography - Variable in class org.openimaj.math.geometry.transforms.HomographyModel
 
homographyMatrix(List<? extends IndependentPair<? extends Point2d, ? extends Point2d>>) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities

Compute the least-squares estimate (the normalised Direct Linear
 Transform approach) of the homography between a set of matching data
 points.

homographyMatrixNorm(List<? extends IndependentPair<? extends Point2d, ? extends Point2d>>) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities

Compute the least-squares estimate (the normalised Direct Linear
 Transform approach) of the homography between a set of matching data
 points.

HomographyModel - Class in org.openimaj.math.geometry.transforms

Implementation of a Homogeneous Homography model - a transform that models
 the relationship between planes under projective constraints (8 D.o.F)

HomographyModel() - Constructor for class org.openimaj.math.geometry.transforms.HomographyModel

Create an HomographyModel that automatically normalises the data
 given to HomographyModel.estimate(List) to get a numerically stable estimate.

HomographyModel(boolean) - Constructor for class org.openimaj.math.geometry.transforms.HomographyModel

Create a HomographyModel with optional automatic normalisation.

HomographyModel(Predicate<HomographyModel>) - Constructor for class org.openimaj.math.geometry.transforms.HomographyModel

Create an HomographyModel that automatically normalises the data
 given to HomographyModel.estimate(List) to get a numerically stable estimate.

HomographyModel(boolean, Predicate<HomographyModel>) - Constructor for class org.openimaj.math.geometry.transforms.HomographyModel

Create a HomographyModel with optional automatic normalisation.

HomographyRefinement - Enum in org.openimaj.math.geometry.transforms

Refinement of homographies estimates using non-linear optimisation
 (Levenberg-Marquardt) under different geometric distance/error assumptions.

homographyToAffine(Matrix) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities

Given a point x and y, calculate the 2x2 affine transform component of
 the 3x3 homography provided such that:

 H = AH_p H = { {h11,h12,h13}, {h21,h22,h23}, {h31,h32,h33} } H_p = {
 {1,0,0}, {0,1,0}, {h31,h32,1} } A = { {a11,a12,a13}, {a21,a22,a23},
 {0,0,1} }

 so

homographyToAffine(Matrix, double, double) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities

Estimate the closest (in the least-squares sense) affine transform for a
 homography.

hstack(Matrix...) - Static method in class org.openimaj.math.matrix.MatrixUtils

horizontally stack all the matrices provided.

HState - Class in org.openimaj.math.geometry.shape.util.polygon

Horizontal edge states

HState() - Constructor for class org.openimaj.math.geometry.shape.util.polygon.HState
 
HungarianAlgorithm - Class in org.openimaj.math.combinatorics.optimisation

An implementation of the Hungarian algorithm for solving the assignment
 problem.

HungarianAlgorithm(Matrix) - Constructor for class org.openimaj.math.combinatorics.optimisation.HungarianAlgorithm

Construct an instance of the algorithm.

HungarianAlgorithm(double[][]) - Constructor for class org.openimaj.math.combinatorics.optimisation.HungarianAlgorithm

Construct an instance of the algorithm.





I

ie - Variable in class org.openimaj.math.geometry.shape.util.polygon.ItNode

Intersecting edge (bundle) pair

ILI - Static variable in class org.openimaj.math.geometry.shape.util.polygon.VertexType

Internal left intermediate

im - Variable in class org.openimaj.math.util.Complex

The imaginary part

IMM - Static variable in class org.openimaj.math.geometry.shape.util.polygon.VertexType

Internal maximum and minimum

IMN - Static variable in class org.openimaj.math.geometry.shape.util.polygon.VertexType

Internal minimum

improveEstimate - Variable in class org.openimaj.math.model.fit.LMedS
 
improveEstimate - Variable in class org.openimaj.math.model.fit.RANSAC
 
IMX - Static variable in class org.openimaj.math.geometry.shape.util.polygon.VertexType

Internal maximum

incrColumn(Matrix, int, double) - Static method in class org.openimaj.math.matrix.MatrixUtils

Increment values in a single column by a constant

incrRow(Matrix, int, double) - Static method in class org.openimaj.math.matrix.MatrixUtils

Increment values in a single column by a constant

index - Variable in class org.openimaj.math.matrix.similarity.SimilarityMatrix
 
indexOf(String) - Method in class org.openimaj.math.matrix.similarity.SimilarityMatrix

Get the offset in the index for a given value

init(List<?>, EstimatableModel<?, ?>) - Method in class org.openimaj.math.model.fit.RANSAC.BestFitStoppingCondition
 
init(List<?>, EstimatableModel<?, ?>) - Method in class org.openimaj.math.model.fit.RANSAC.NumberInliersStoppingCondition
 
init(List<?>, EstimatableModel<?, ?>) - Method in class org.openimaj.math.model.fit.RANSAC.PercentageInliersStoppingCondition
 
init(List<?>, EstimatableModel<?, ?>) - Method in class org.openimaj.math.model.fit.RANSAC.ProbabilisticMinInliersStoppingCondition
 
init(List<?>, EstimatableModel<?, ?>) - Method in interface org.openimaj.math.model.fit.RANSAC.StoppingCondition

Initialise the stopping condition if necessary.

initializePhase(int) - Method in class org.openimaj.math.combinatorics.optimisation.HungarianAlgorithm

Initialize the next phase of the algorithm by clearing the committed
 workers and jobs sets and by initializing the slack arrays to the values
 corresponding to the specified root worker.

inliers - Variable in class org.openimaj.math.model.fit.LMedS
 
inliers - Variable in class org.openimaj.math.model.fit.RANSAC
 
Interpolation - Class in org.openimaj.math.util

Static methods for performing interpolation

Interpolation() - Constructor for class org.openimaj.math.util.Interpolation
 
intersect(Polygon) - Method in class org.openimaj.math.geometry.shape.Polygon

Returns the intersection of this polygon and the given polygon.

intersection(Polygon, Polygon, Class<Polygon>) - Method in class org.openimaj.math.geometry.shape.util.PolygonUtils

Return the intersection of p1 and p2 where the
 return type is of polyClass.

intersection(Polygon, Polygon) - Method in class org.openimaj.math.geometry.shape.util.PolygonUtils

Return the intersection of p1 and p2 where the
 return type is of PolyDefault.

intersectionArea(Shape) - Method in class org.openimaj.math.geometry.shape.Circle
 
intersectionArea(Shape, int) - Method in class org.openimaj.math.geometry.shape.Circle
 
intersectionArea(Shape) - Method in class org.openimaj.math.geometry.shape.Ellipse
 
intersectionArea(Shape, int) - Method in class org.openimaj.math.geometry.shape.Ellipse
 
intersectionArea(Shape) - Method in class org.openimaj.math.geometry.shape.Polygon

Calls Polygon.intersectionArea(Shape, int) with 1 step per pixel
 dimension.

intersectionArea(Shape, int) - Method in class org.openimaj.math.geometry.shape.Polygon

Return an estimate for the area of the intersection of this polygon and
 another polygon.

intersectionArea(Shape) - Method in class org.openimaj.math.geometry.shape.Rectangle
 
intersectionArea(Shape, int) - Method in class org.openimaj.math.geometry.shape.Rectangle
 
intersectionArea(Shape) - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
 
intersectionArea(Shape, int) - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
 
intersectionArea(Shape) - Method in interface org.openimaj.math.geometry.shape.Shape

Calls Polygon.intersectionArea(Shape, int) with 1 step per pixel
 dimension.

intersectionArea(Shape, int) - Method in interface org.openimaj.math.geometry.shape.Shape

Return an estimate for the area of the intersection of this polygon and
 another polygon.

intersectionArea(Shape) - Method in class org.openimaj.math.geometry.shape.Triangle
 
intersectionArea(Shape, int) - Method in class org.openimaj.math.geometry.shape.Triangle
 
intersectionPoint - Variable in class org.openimaj.math.geometry.line.Line2d.IntersectionResult

The point at which the lines intersect (if the type is INTERSECTING)

IntersectionResult(Line2d.IntersectionType) - Constructor for class org.openimaj.math.geometry.line.Line2d.IntersectionResult

Construct the IntersectionResult with the given type

IntersectionResult(Point2d) - Constructor for class org.openimaj.math.geometry.line.Line2d.IntersectionResult

Construct the IntersectionResult with the given intersection point

intersectionSides(Line2d) - Method in class org.openimaj.math.geometry.shape.Triangle

The intersection of this triangle with the line defined by y = mx + c.

InvertData - Class in org.openimaj.math.matrix.similarity.processor

A similarity matrix processor that sets inverts all values
 by setting the smallest to the biggest, etc.

InvertData() - Constructor for class org.openimaj.math.matrix.similarity.processor.InvertData

Default constructor.

invSqrtSym(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Compute the inverse square root, X, of the symmetric matrix A; A^-(1/2)

IRI - Static variable in class org.openimaj.math.geometry.shape.util.polygon.VertexType

Internal right intermediate

isClockwise() - Method in class org.openimaj.math.geometry.shape.Polygon

Test (outer) polygon path direction

isClosed() - Method in class org.openimaj.math.geometry.shape.Polygon

Is the polygon closed (i.e.

isConvex() - Method in class org.openimaj.math.geometry.shape.Circle
 
isConvex() - Method in class org.openimaj.math.geometry.shape.Ellipse
 
isConvex() - Method in class org.openimaj.math.geometry.shape.Polygon

Test if the outer polygon is convex.

isConvex() - Method in class org.openimaj.math.geometry.shape.Rectangle
 
isConvex() - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
 
isConvex() - Method in interface org.openimaj.math.geometry.shape.Shape

Test if the shape is convex.

isConvex() - Method in class org.openimaj.math.geometry.shape.Triangle
 
isDistance() - Method in class org.openimaj.math.statistics.distribution.metrics.GaussianKLDivergence
 
isDistance() - Method in class org.openimaj.math.statistics.distribution.metrics.SampledMultivariateDistanceComparator
 
isEmpty() - Method in class org.openimaj.math.geometry.shape.Polygon

Return whether this polygon has no vertices or not.

isHole() - Method in class org.openimaj.math.geometry.shape.Polygon

Returns whether this polygon is representing a hole in another polygon.

isImproveEstimate() - Method in class org.openimaj.math.model.fit.RANSAC
 
isInLine(Point2d, float) - Method in class org.openimaj.math.geometry.line.Line2d

Tests whether the given point lies on this line.

isInside(Point2d) - Method in class org.openimaj.math.geometry.shape.Circle
 
isInside(Point2d) - Method in class org.openimaj.math.geometry.shape.Ellipse
 
isInside(Point2d) - Method in class org.openimaj.math.geometry.shape.Polygon

Test whether the point p is inside the polygon using the winding rule
 algorithm.

isInside(Point2d) - Method in class org.openimaj.math.geometry.shape.Rectangle
 
isInside(Rectangle) - Method in class org.openimaj.math.geometry.shape.Rectangle

Test if the given rectangle is inside this one.

isInside(Point2d) - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
 
isInside(Point2d) - Method in interface org.openimaj.math.geometry.shape.Shape

Test whether the point p is inside the shape.

isInside(Point2d) - Method in class org.openimaj.math.geometry.shape.Triangle
 
isInsideOnLine(Point2d) - Method in class org.openimaj.math.geometry.shape.Triangle

Like Triangle.isInside(Point2d) but counts being "on the line" as being
 inside also

isOnLine(Point2d, float) - Method in class org.openimaj.math.geometry.line.Line2d

Tests whether the given point lies on this line.

isOverlapping(Rectangle) - Method in class org.openimaj.math.geometry.shape.Rectangle

Test if rectangles overlap.

iterator() - Method in class org.openimaj.math.geometry.point.PointList
ItNode - Class in org.openimaj.math.geometry.shape.util.polygon

Intersection table

ItNode(EdgeNode, EdgeNode, double, double, ItNode) - Constructor for class org.openimaj.math.geometry.shape.util.polygon.ItNode
 




J

JamaDenseMatrix - Class in org.openimaj.math.matrix

Dense matrix wrapper for a JAMA matrix.

JamaDenseMatrix(Matrix) - Constructor for class org.openimaj.math.matrix.JamaDenseMatrix

Construct with matrix.

JamaDenseMatrix(double[][]) - Constructor for class org.openimaj.math.matrix.JamaDenseMatrix

Construct with 2d array of data.

JamaDenseMatrix(int, int) - Constructor for class org.openimaj.math.matrix.JamaDenseMatrix

Construct with given dimensions.





L

learnBasis(Map<?, double[][]>) - Method in class org.openimaj.math.matrix.algorithm.LinearDiscriminantAnalysis

Learn the LDA basis.

learnBasis(List<double[][]>) - Method in class org.openimaj.math.matrix.algorithm.LinearDiscriminantAnalysis

Learn the LDA basis.

learnBasis(List<double[]>) - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis

Learn the principal components of the given data list.

learnBasis(double[][]) - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis

Learn the principal components of the given data array.

learnBasis(Matrix) - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis

Learn the principal components of the given data matrix.

learnBasisIP(List<? extends IndependentPair<?, double[]>>) - Method in class org.openimaj.math.matrix.algorithm.LinearDiscriminantAnalysis

Learn the LDA basis.

learnBasisLL(List<List<double[]>>) - Method in class org.openimaj.math.matrix.algorithm.LinearDiscriminantAnalysis

Learn the LDA basis.

learnBasisML(Map<?, List<double[]>>) - Method in class org.openimaj.math.matrix.algorithm.LinearDiscriminantAnalysis

Learn the LDA basis.

learnBasisNorm(Matrix) - Method in class org.openimaj.math.matrix.algorithm.pca.CovarPrincipalComponentAnalysis
 
learnBasisNorm(Matrix) - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis

Learn the PCA basis from the centered data provided.

learnBasisNorm(Matrix) - Method in class org.openimaj.math.matrix.algorithm.pca.SvdPrincipalComponentAnalysis
 
learnBasisNorm(Matrix) - Method in class org.openimaj.math.matrix.algorithm.pca.ThinSvdPrincipalComponentAnalysis
 
LeastSquaresLinearModel - Class in org.openimaj.math.model

Model of mapping between pairs of integers learned from a least-squares
 regression.

LeastSquaresLinearModel() - Constructor for class org.openimaj.math.model.LeastSquaresLinearModel

Construct model

LeastSquaresLinearModel(int) - Constructor for class org.openimaj.math.model.LeastSquaresLinearModel

Construct model

LED - Static variable in class org.openimaj.math.geometry.shape.util.polygon.VertexType

Left edge

LEFT - Static variable in class org.openimaj.math.geometry.shape.util.PolygonUtils

LEFT

lerp(float, float, float, float, float) - Static method in class org.openimaj.math.util.Interpolation

Linear interpolation of y at x given x0,y0 and x1,y1.

lerp(double, double, double, double, double) - Static method in class org.openimaj.math.util.Interpolation

Linear interpolation of y at x given x0,y0 and x1,y1.

less - Variable in class org.openimaj.math.geometry.shape.util.polygon.ScanBeamTree
 
lessThan(Vector, double) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
 
lessThan(Matrix, double) - Static method in class org.openimaj.math.matrix.MatrixUtils
 
lessThanSet(Matrix, int, int) - Static method in class org.openimaj.math.matrix.MatrixUtils

for every value in x less than val set toset

Line2d - Class in org.openimaj.math.geometry.line

A line in two-dimensional space.

Line2d() - Constructor for class org.openimaj.math.geometry.line.Line2d

Construct a line

Line2d(Point2d, Point2d) - Constructor for class org.openimaj.math.geometry.line.Line2d

Construct a line

Line2d(float, float, float, float) - Constructor for class org.openimaj.math.geometry.line.Line2d

Construct a line

Line2d.IntersectionResult - Class in org.openimaj.math.geometry.line

The result of a line intersection.

Line2d.IntersectionType - Enum in org.openimaj.math.geometry.line

The type of a result of a line intersection

LinearDiscriminantAnalysis - Class in org.openimaj.math.matrix.algorithm

Implementation of Multiclass Linear Discriminant Analysis.

LinearDiscriminantAnalysis(int) - Constructor for class org.openimaj.math.matrix.algorithm.LinearDiscriminantAnalysis

Construct with the given number of components.

LinearResampler - Class in org.openimaj.math.geometry.path.resample

Simple linear resampling.

LinearResampler(int) - Constructor for class org.openimaj.math.geometry.path.resample.LinearResampler

Construct with the given number of target vertices for lines to have

lineFromRotation(int, int, double, int) - Static method in class org.openimaj.math.geometry.line.Line2d

Create a line of a given length that starts at a point and has a given
 angle.

lineIterator() - Method in class org.openimaj.math.geometry.line.Line2d
 
lineIterator() - Method in interface org.openimaj.math.geometry.path.Path2d

Convert the path to a iterated polyline representation

lineIterator() - Method in class org.openimaj.math.geometry.path.Polyline
 
lineWithinSquare(Rectangle) - Method in class org.openimaj.math.geometry.line.Line2d

Given a rectangle, return the line that actually fits inside the
 rectangle for this line

LMedS<I,D,M extends EstimatableModel<I,D>> - Class in org.openimaj.math.model.fit

Least Median of Squares robust model fitting

LMedS(M, ResidualCalculator<I, D, M>, boolean) - Constructor for class org.openimaj.math.model.fit.LMedS

Construct with the given model and residual calculator.

LMedS(M, ResidualCalculator<I, D, M>, double, boolean) - Constructor for class org.openimaj.math.model.fit.LMedS

Construct with the given model, residual calculator and estimated
 proportion of outliers.

LMedS(M, ResidualCalculator<I, D, M>, double, double, double, boolean) - Constructor for class org.openimaj.math.model.fit.LMedS

Construct with the given model, residual calculator and estimated
 proportion of outliers.

LMedS(M, ResidualCalculator<I, D, M>, boolean, CollectionSampler<IndependentPair<I, D>>) - Constructor for class org.openimaj.math.model.fit.LMedS

Construct with the given model and residual calculator.

LMedS(M, ResidualCalculator<I, D, M>, double, boolean, CollectionSampler<IndependentPair<I, D>>) - Constructor for class org.openimaj.math.model.fit.LMedS

Construct with the given model, residual calculator and estimated
 proportion of outliers.

LMedS(M, ResidualCalculator<I, D, M>, double, double, double, boolean, CollectionSampler<IndependentPair<I, D>>) - Constructor for class org.openimaj.math.model.fit.LMedS

Construct with the given model, residual calculator and estimated
 proportion of outliers.

LmtNode - Class in org.openimaj.math.geometry.shape.util.polygon

Local minima table

LmtNode(double) - Constructor for class org.openimaj.math.geometry.shape.util.polygon.LmtNode
 
LmtTable - Class in org.openimaj.math.geometry.shape.util.polygon
 
LmtTable() - Constructor for class org.openimaj.math.geometry.shape.util.polygon.LmtTable
 
logProbability(double[][], MultivariateGaussian[]) - Static method in class org.openimaj.math.statistics.distribution.MixtureOfGaussians

Compute the log probability of the given data points belonging to each of
 the given gaussians

logProbability(double[][]) - Method in class org.openimaj.math.statistics.distribution.MixtureOfGaussians

Compute the log probability of the given data points belonging to each of
 the gaussians

logSum(double, double) - Static method in class org.openimaj.math.util.MathUtils

Given log(a) and log(b) calculate log(a + b) boils down to log(
 exp(log_a) + exp(log_b) ) but this might overflow, so we turn this into
 log([exp(log_a - log_c) + exp(log_b - log_c)]exp(log_c)) and we set log_c
 == max(log_a,log_b) and so it becomes: LARGE + log(1 + exp(SMALL -
 LARGE)) == LARGE + log(1 + SMALL) ~= large the whole idea being to avoid
 an overflow (exp(LARGE) == VERY LARGE == overflow)





M

main(String[]) - Static method in class org.openimaj.math.matrix.GramSchmidtProcess
 
main(String[]) - Static method in class org.openimaj.math.model.GaussianVectorNaiveBayesModel

Testing

main(String[]) - Static method in class org.openimaj.math.model.UnivariateGaussianNaiveBayesModel

Testing

makeTransform(Rectangle, Rectangle) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities

Create a transform to transform from one rectangle to another.

mantissa - Variable in class org.openimaj.math.util.MathUtils.ExponentAndMantissa

The mantissa

match(int, int) - Method in class org.openimaj.math.combinatorics.optimisation.HungarianAlgorithm

Helper method to record a matching between worker w and job j.

MathUtils - Class in org.openimaj.math.util

A collection of maths functions not available anywhere else ive seen

MathUtils() - Constructor for class org.openimaj.math.util.MathUtils
 
MathUtils.ExponentAndMantissa - Class in org.openimaj.math.util

Class to hold an exponent and mantissa

MatlibMatrixUtils - Class in org.openimaj.math.matrix

Some helpful operations on Matrix instances from Adrian Kuhn's
 library.

MatlibMatrixUtils() - Constructor for class org.openimaj.math.matrix.MatlibMatrixUtils
 
matrix - Variable in class org.openimaj.math.matrix.JamaDenseMatrix

The underlying matrix

matrixFromFloat(float[][]) - Static method in class org.openimaj.math.matrix.MatrixUtils

Construct a matrix from a 2D float array of data.

MatrixTransformProvider - Interface in org.openimaj.math.geometry.transforms

Interface for classes implementing a model of a matrix transformation.

MatrixUtils - Class in org.openimaj.math.matrix

Miscellaneous matrix operations.

max(Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils

Get the maximum element value

max(Vector) - Static method in class org.openimaj.math.matrix.CFMatrixUtils

Get the maximum element value

max(Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

uses the second value returned by MatlibMatrixUtils.minmaxmean(Matrix)

maxAbsDiag(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Get the maximum absolute value of the diagonal.

maxInplace(SparseMatrix, SparseMatrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
 
maxIter - Variable in class org.openimaj.math.geometry.shape.PointDistributionModel
 
maxX() - Method in interface org.openimaj.math.geometry.GeometricObject2d
 
maxX() - Method in class org.openimaj.math.geometry.line.Line2d
 
maxX() - Method in class org.openimaj.math.geometry.point.PointList
 
maxX() - Method in class org.openimaj.math.geometry.shape.Circle
 
maxX() - Method in class org.openimaj.math.geometry.shape.Ellipse
 
maxX() - Method in class org.openimaj.math.geometry.shape.Rectangle
 
maxX() - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
 
maxX() - Method in class org.openimaj.math.geometry.shape.Triangle
 
maxY() - Method in interface org.openimaj.math.geometry.GeometricObject2d
 
maxY() - Method in class org.openimaj.math.geometry.line.Line2d
 
maxY() - Method in class org.openimaj.math.geometry.point.PointList
 
maxY() - Method in class org.openimaj.math.geometry.shape.Circle
 
maxY() - Method in class org.openimaj.math.geometry.shape.Ellipse
 
maxY() - Method in class org.openimaj.math.geometry.shape.Rectangle
 
maxY() - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
 
maxY() - Method in class org.openimaj.math.geometry.shape.Triangle
 
mean - Variable in class org.openimaj.math.geometry.shape.PointDistributionModel
 
mean - Variable in class org.openimaj.math.matrix.algorithm.LinearDiscriminantAnalysis
 
mean - Variable in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis
 
mean(Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

uses the third value returned by MatlibMatrixUtils.minmaxmean(Matrix)

mean - Variable in class org.openimaj.math.statistics.distribution.AbstractMultivariateGaussian

The mean vector

mean - Variable in class org.openimaj.math.statistics.MeanAndCovariance

The mean vector (1xN)

mean(double[]) - Static method in class org.openimaj.math.util.DoubleArrayStatsUtils

Find the mean of a single dimensional double array.

mean(double[][]) - Static method in class org.openimaj.math.util.DoubleArrayStatsUtils

Calculate the mean of a two dimensional double array.

mean(float[]) - Static method in class org.openimaj.math.util.FloatArrayStatsUtils

Find the mean of a single dimensional float array.

mean(float[][]) - Static method in class org.openimaj.math.util.FloatArrayStatsUtils

Calculate the mean of a two dimensional float array.

mean() - Method in class org.openimaj.math.util.RunningStat

Returns the running mean.

MeanAndCovariance - Class in org.openimaj.math.statistics

Class to compute the mean and covariance of some given data.

MeanAndCovariance(float[][]) - Constructor for class org.openimaj.math.statistics.MeanAndCovariance

Construct a new MeanAndCovariance containing the mean vector and
 covariance matrix of the given data (each row is a data point)

MeanAndCovariance(double[][]) - Constructor for class org.openimaj.math.statistics.MeanAndCovariance

Construct a new MeanAndCovariance containing the mean vector and
 covariance matrix of the given data (each row is a data point)

MeanAndCovariance(Matrix) - Constructor for class org.openimaj.math.statistics.MeanAndCovariance

Construct a new MeanAndCovariance containing the mean vector and
 covariance matrix of the given data (each row is a data point)

MeanVector - Class in org.openimaj.math.matrix

holds an updatable mean vector

MeanVector() - Constructor for class org.openimaj.math.matrix.MeanVector
 
median(double[]) - Static method in class org.openimaj.math.util.DoubleArrayStatsUtils

Calculate the median of the given array.

median(double[], int, int) - Static method in class org.openimaj.math.util.DoubleArrayStatsUtils

Calculate the median of the given sub-array.

median(float[]) - Static method in class org.openimaj.math.util.FloatArrayStatsUtils

Calculate the median of the given array.

median(float[], int, int) - Static method in class org.openimaj.math.util.FloatArrayStatsUtils

Calculate the median of the given sub-array.

merge_left(PolygonNode, PolygonNode) - Method in class org.openimaj.math.geometry.shape.util.polygon.TopPolygonNode
 
merge_right(PolygonNode, PolygonNode) - Method in class org.openimaj.math.geometry.shape.util.polygon.TopPolygonNode
 
min(Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils

Get the minimum element value

min(Vector) - Static method in class org.openimaj.math.matrix.CFMatrixUtils

Get the minimum element value

min(Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

uses the first value returned by MatlibMatrixUtils.minmaxmean(Matrix)

min(Matrix, Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

min(A,B) returns an array the same size as A and B with the smallest
 elements taken from A or B.

MIN_COVAR_RECONDITION - Static variable in class org.openimaj.math.statistics.distribution.MixtureOfGaussians

Amount to add to the diagonal of the covariance matrix if it's
 ill-conditioned.

minAbsDiag(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Get the minimum absolute value of the diagonal.

minimumBoundingRectangle() - Method in class org.openimaj.math.geometry.shape.Circle
 
minimumBoundingRectangle() - Method in class org.openimaj.math.geometry.shape.Ellipse
 
minimumBoundingRectangle() - Method in class org.openimaj.math.geometry.shape.Polygon

Compute the minimum size rotated bounding rectangle that contains this
 shape using the rotating calipers approach.

minimumBoundingRectangle(boolean) - Method in class org.openimaj.math.geometry.shape.Polygon

Compute the minimum size rotated bounding rectangle that contains this
 shape using the rotating calipers approach.

minimumBoundingRectangle() - Method in class org.openimaj.math.geometry.shape.Rectangle
 
minimumBoundingRectangle() - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
 
minimumBoundingRectangle() - Method in interface org.openimaj.math.geometry.shape.Shape

Compute the minimum size rotated bounding rectangle that contains this
 shape.

minimumBoundingRectangle() - Method in class org.openimaj.math.geometry.shape.Triangle
 
minInplace(SparseMatrix, SparseMatrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
 
minmaxmean(Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Calculate all 3, used by MatlibMatrixUtils.min(Matrix), MatlibMatrixUtils.max(Matrix) and
 MatlibMatrixUtils.mean(Matrix)

minus(Point2d) - Method in class org.openimaj.math.geometry.point.AbstractPoint2d
 
minus(Point2d) - Method in interface org.openimaj.math.geometry.point.Point2d

Take point point from another point such that return = this - a

minus(Point2d) - Method in class org.openimaj.math.geometry.point.Point2dImpl
 
minus(Point3d) - Method in interface org.openimaj.math.geometry.point.Point3d

Take point point from another point such that return = this - a

minus(Point3d) - Method in class org.openimaj.math.geometry.point.Point3dImpl
 
minus(T, double) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
 
minus(Vector, Vector) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
 
minus(double, T) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
 
minus(Matrix, Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Subtract matrices A-B

minus(Matrix, double) - Static method in class org.openimaj.math.matrix.MatrixUtils

Subtract a constant from all values

minusCol(Matrix, Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Subtract the given col vector (held as a Matrix) from every col of the
 given matrix, returning the result in a new matrix.

minusEqualsCol(Matrix, Vector) - Static method in class org.openimaj.math.matrix.CFMatrixUtils
 
minusEqualsRow(Matrix, Vector) - Static method in class org.openimaj.math.matrix.CFMatrixUtils
 
minusInplace(DiagonalMatrix, T) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Subtract two matrices, storing the result in the second:
 A = D - A

minusInplace(Matrix, Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Subtract two matrices, storing the result in the first:
 A = A - B

minusInplace(T, Vector) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Subtract a vector from another vector A = A - D

minusRow(Matrix, double[]) - Static method in class org.openimaj.math.matrix.MatrixUtils

Subtract the given row vector from every row of the given matrix,
 returning the result in a new matrix.

minX() - Method in interface org.openimaj.math.geometry.GeometricObject2d
 
minX() - Method in class org.openimaj.math.geometry.line.Line2d
 
minX() - Method in class org.openimaj.math.geometry.point.PointList
 
minX() - Method in class org.openimaj.math.geometry.shape.Circle
 
minX() - Method in class org.openimaj.math.geometry.shape.Ellipse
 
minX() - Method in class org.openimaj.math.geometry.shape.Rectangle
 
minX() - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
 
minX() - Method in class org.openimaj.math.geometry.shape.Triangle
 
minY() - Method in interface org.openimaj.math.geometry.GeometricObject2d
 
minY() - Method in class org.openimaj.math.geometry.line.Line2d
 
minY() - Method in class org.openimaj.math.geometry.point.PointList
 
minY() - Method in class org.openimaj.math.geometry.shape.Circle
 
minY() - Method in class org.openimaj.math.geometry.shape.Ellipse
 
minY() - Method in class org.openimaj.math.geometry.shape.Rectangle
 
minY() - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
 
minY() - Method in class org.openimaj.math.geometry.shape.Triangle
 
MixtureOfGaussians - Class in org.openimaj.math.statistics.distribution

Implementation of a mixture of gaussians (gaussian mixture model).

MixtureOfGaussians(MultivariateGaussian[], double[]) - Constructor for class org.openimaj.math.statistics.distribution.MixtureOfGaussians

Construct the mixture with the given gaussians and weights

model - Variable in class org.openimaj.math.model.fit.LMedS
 
model - Variable in class org.openimaj.math.model.fit.RANSAC
 
model - Variable in class org.openimaj.math.model.fit.residuals.AbstractResidualCalculator
 
Model<I,D> - Interface in org.openimaj.math.model

The Model interface defines a mathematical model which links dependent and
 independent variables.

modelCheck - Variable in class org.openimaj.math.geometry.transforms.AffineTransformModel
 
modelCheck - Variable in class org.openimaj.math.geometry.transforms.HomographyModel
 
modelConstructionData - Variable in class org.openimaj.math.model.fit.RANSAC
 
ModelDistanceCheck - Class in org.openimaj.math.util.distance

Implementation of a DistanceCheck that tests the distance against a
 EstimatableModel.

ModelDistanceCheck(Model<Double, Boolean>) - Constructor for class org.openimaj.math.util.distance.ModelDistanceCheck

Construct using the given model.

ModelFitting<I,D,M extends Model<I,D>> - Interface in org.openimaj.math.model.fit

An interface that describes an object capable of fitting data to a model in a
 more generic way than through the Model's estimate method.

more - Variable in class org.openimaj.math.geometry.shape.util.polygon.ScanBeamTree
 
mtjToDoubleArray(DenseMatrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Convert an mtj matrix into a 2d double array

mult(Vector) - Method in class org.openimaj.math.matrix.DiagonalMatrix
 
MultidimensionalScaling - Class in org.openimaj.math.matrix.similarity.processor

Implementation of Multidimensional Scaling.

MultidimensionalScaling() - Constructor for class org.openimaj.math.matrix.similarity.processor.MultidimensionalScaling

Default constructor.

MultidimensionalScaling(Random) - Constructor for class org.openimaj.math.matrix.similarity.processor.MultidimensionalScaling

Construct with the given random number generator and default learning
 rate at 0.01 and the maximum number of iterations to 1000.

MultidimensionalScaling(int, double) - Constructor for class org.openimaj.math.matrix.similarity.processor.MultidimensionalScaling

Construct MDS with the given maximum number of iterations and rate.

MultidimensionalScaling(int, double, Random) - Constructor for class org.openimaj.math.matrix.similarity.processor.MultidimensionalScaling

Construct MDS with the given maximum number of iterations, rate and
 random number generator.

MultivariateDistribution - Interface in org.openimaj.math.statistics.distribution

A continuous multivariate distribution.

MultivariateGaussian - Interface in org.openimaj.math.statistics.distribution

Interface describing a multivariate gaussian distribution

MultivariateKernelDensityEstimate - Class in org.openimaj.math.statistics.distribution

A Parzen window kernel density estimate using a univariate kernel and
 Euclidean distance.

MultivariateKernelDensityEstimate(double[][], UnivariateKernel, double) - Constructor for class org.openimaj.math.statistics.distribution.MultivariateKernelDensityEstimate

Construct with the given data, kernel and bandwidth

MultivariateKernelDensityEstimate(List<double[]>, UnivariateKernel, double) - Constructor for class org.openimaj.math.statistics.distribution.MultivariateKernelDensityEstimate

Construct with the given data, kernel and bandwidth





N

N - Variable in class org.openimaj.math.statistics.distribution.CachingMultivariateGaussian
 
ndims - Variable in class org.openimaj.math.matrix.algorithm.whitening.PCAWhitening
 
newInstance(int, int) - Method in class org.openimaj.math.matrix.DiagonalMatrix
 
newInstance(int, int) - Method in class org.openimaj.math.matrix.JamaDenseMatrix
 
next - Variable in class org.openimaj.math.geometry.shape.util.polygon.EdgeNode

Next edge in the AET

next - Variable in class org.openimaj.math.geometry.shape.util.polygon.ItNode

The next intersection table node

next - Variable in class org.openimaj.math.geometry.shape.util.polygon.LmtNode

Pointer to next local minimum

next_bound - Variable in class org.openimaj.math.geometry.shape.util.polygon.EdgeNode

Pointer to next bound in LMT

next_h_state - Variable in class org.openimaj.math.geometry.shape.util.polygon.HState

Horizontal edge state transitions within scanbeam boundary

NEXT_INDEX(int, int) - Static method in class org.openimaj.math.geometry.shape.util.PolygonUtils
 
nextPowerOf2(int) - Static method in class org.openimaj.math.util.MathUtils

Returns the next power of 2 superior to n.

NH - Static variable in class org.openimaj.math.geometry.shape.util.polygon.HState

No horizontal edge

nIter - Variable in class org.openimaj.math.model.fit.RANSAC
 
no.uib.cipr.matrix - package no.uib.cipr.matrix
 
norm2(Vector) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Compute the 2-norm (Euclidean norm) of the vector

normalise - Variable in class org.openimaj.math.geometry.transforms.FundamentalModel
 
normalise - Variable in class org.openimaj.math.geometry.transforms.HomographyModel
 
normalise(List<? extends IndependentPair<Point2d, Point2d>>, Pair<Matrix>) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities

Normalise the data, returning a normalised copy.

normalise(IndependentPair<Point2d, Point2d>, Pair<Matrix>) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities

Normalise the data, returning a normalised copy.

normalise(double[]) - Method in interface org.openimaj.math.statistics.normalisation.Normaliser

Normalise the vector.

normalise(double[][]) - Method in interface org.openimaj.math.statistics.normalisation.Normaliser

Normalise the data.

normalise(double[]) - Method in class org.openimaj.math.statistics.normalisation.PerExampleMeanCenter
 
normalise(double[][]) - Method in class org.openimaj.math.statistics.normalisation.PerExampleMeanCenter
 
normalise(double[]) - Method in class org.openimaj.math.statistics.normalisation.PerExampleMeanCenterVar
 
normalise(double[][]) - Method in class org.openimaj.math.statistics.normalisation.PerExampleMeanCenterVar
 
normalise(double[]) - Method in class org.openimaj.math.statistics.normalisation.ZScore
 
normalise(double[][]) - Method in class org.openimaj.math.statistics.normalisation.ZScore
 
NormaliseData - Class in org.openimaj.math.matrix.similarity.processor

Normalise and optionally invert a SimilarityMatrix.

NormaliseData() - Constructor for class org.openimaj.math.matrix.similarity.processor.NormaliseData

Default constructor.

NormaliseData(boolean) - Constructor for class org.openimaj.math.matrix.similarity.processor.NormaliseData

Default constructor.

Normaliser - Interface in org.openimaj.math.statistics.normalisation

Interface describing an object that can apply normalisation to some data
 vectors.

normF(Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Compute the Frobenius norm

normTransformMatrix() - Method in class org.openimaj.math.geometry.shape.Ellipse

Get the normalised transform matrix such that the scale of this ellipse
 is removed (i.e.

NOT_FMAX(int) - Method in class org.openimaj.math.geometry.shape.util.polygon.EdgeTable
 
NOT_RMAX(int) - Method in class org.openimaj.math.geometry.shape.util.polygon.EdgeTable
 
ns - Variable in class org.openimaj.math.matrix.algorithm.whitening.PCAWhitening
 
ntuples(Matrix, Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Given two row vectors, construct the power set of rowvector combinations

NUL - Static variable in class org.openimaj.math.geometry.shape.util.polygon.VertexType

Empty non-intersection

NullConstraint() - Constructor for class org.openimaj.math.geometry.shape.PointDistributionModel.NullConstraint
 
NullModel<T> - Class in org.openimaj.math.geometry.transforms

A NullModel models a one-to-one mapping of data.

NullModel() - Constructor for class org.openimaj.math.geometry.transforms.NullModel
 
NUM_TRIALS - Static variable in class org.openimaj.math.geometry.transforms.estimation.sampling.BucketingSampler2d

Maximum allowed number of trials in picking a bucket that has not been
 previously picked.

NumberComponentSelector(int) - Constructor for class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis.NumberComponentSelector

Construct with the number of components required

NumberInliersStoppingCondition(int) - Constructor for class org.openimaj.math.model.fit.RANSAC.NumberInliersStoppingCondition

Construct the stopping condition with the given threshold on the
 number of data points which must match for a model to be considered a
 fit.

numComponents - Variable in class org.openimaj.math.geometry.shape.PointDistributionModel
 
numComponents - Variable in class org.openimaj.math.matrix.algorithm.LinearDiscriminantAnalysis
 
numDataValues() - Method in class org.openimaj.math.util.RunningStat

Returns the number of data values that have been processed.

numDims() - Method in class org.openimaj.math.statistics.distribution.AbstractMultivariateGaussian
 
numDims() - Method in class org.openimaj.math.statistics.distribution.CachingMultivariateGaussian
 
numDims() - Method in interface org.openimaj.math.statistics.distribution.MultivariateGaussian

Get the dimensionality

numItemsToEstimate() - Method in class org.openimaj.math.geometry.transforms.AffineTransformModel
 
numItemsToEstimate() - Method in class org.openimaj.math.geometry.transforms.AffineTransformModel3d
 
numItemsToEstimate() - Method in class org.openimaj.math.geometry.transforms.estimation.RobustAffineTransformEstimator
 
numItemsToEstimate() - Method in class org.openimaj.math.geometry.transforms.estimation.RobustFundamentalEstimator
 
numItemsToEstimate() - Method in class org.openimaj.math.geometry.transforms.estimation.RobustHomographyEstimator
 
numItemsToEstimate() - Method in class org.openimaj.math.geometry.transforms.FundamentalModel
 
numItemsToEstimate() - Method in class org.openimaj.math.geometry.transforms.HomographyModel
 
numItemsToEstimate() - Method in class org.openimaj.math.geometry.transforms.NullModel
 
numItemsToEstimate() - Method in class org.openimaj.math.geometry.transforms.RigidTransformModel3d
 
numItemsToEstimate() - Method in interface org.openimaj.math.model.EstimatableModel
 
numItemsToEstimate() - Method in class org.openimaj.math.model.fit.LMedS
 
numItemsToEstimate() - Method in interface org.openimaj.math.model.fit.ModelFitting
 
numItemsToEstimate() - Method in class org.openimaj.math.model.fit.RANSAC
 
numItemsToEstimate() - Method in class org.openimaj.math.model.fit.SimpleModelFitting
 
numItemsToEstimate() - Method in class org.openimaj.math.model.GaussianVectorNaiveBayesModel
 
numItemsToEstimate() - Method in class org.openimaj.math.model.LeastSquaresLinearModel
 
numItemsToEstimate() - Method in class org.openimaj.math.model.UnivariateGaussianNaiveBayesModel
 
numIterations - Variable in class org.openimaj.math.matrix.similarity.processor.MultidimensionalScaling
 
nVertices() - Method in class org.openimaj.math.geometry.shape.Polygon

Get the number of vertices





O

ones(int) - Static method in class org.openimaj.math.matrix.DiagonalMatrix
 
ones(int, int) - Static method in class org.openimaj.math.matrix.MatrixUtils
 
open() - Method in class org.openimaj.math.geometry.shape.Polygon

Open the polygon if it's closed

OperationType - Class in org.openimaj.math.geometry.shape.util.polygon
 
org.openimaj.math.combinatorics.optimisation - package org.openimaj.math.combinatorics.optimisation
 
org.openimaj.math.geometry - package org.openimaj.math.geometry
 
org.openimaj.math.geometry.line - package org.openimaj.math.geometry.line
 
org.openimaj.math.geometry.path - package org.openimaj.math.geometry.path
 
org.openimaj.math.geometry.path.resample - package org.openimaj.math.geometry.path.resample
 
org.openimaj.math.geometry.point - package org.openimaj.math.geometry.point
 
org.openimaj.math.geometry.shape - package org.openimaj.math.geometry.shape
 
org.openimaj.math.geometry.shape.algorithm - package org.openimaj.math.geometry.shape.algorithm
 
org.openimaj.math.geometry.shape.util - package org.openimaj.math.geometry.shape.util
 
org.openimaj.math.geometry.shape.util.polygon - package org.openimaj.math.geometry.shape.util.polygon
 
org.openimaj.math.geometry.transforms - package org.openimaj.math.geometry.transforms
 
org.openimaj.math.geometry.transforms.check - package org.openimaj.math.geometry.transforms.check
 
org.openimaj.math.geometry.transforms.estimation - package org.openimaj.math.geometry.transforms.estimation
 
org.openimaj.math.geometry.transforms.estimation.sampling - package org.openimaj.math.geometry.transforms.estimation.sampling
 
org.openimaj.math.geometry.transforms.residuals - package org.openimaj.math.geometry.transforms.residuals
 
org.openimaj.math.geometry.triangulation - package org.openimaj.math.geometry.triangulation
 
org.openimaj.math.graph - package org.openimaj.math.graph
 
org.openimaj.math.graph.algorithm - package org.openimaj.math.graph.algorithm
 
org.openimaj.math.matrix - package org.openimaj.math.matrix
 
org.openimaj.math.matrix.algorithm - package org.openimaj.math.matrix.algorithm
 
org.openimaj.math.matrix.algorithm.pca - package org.openimaj.math.matrix.algorithm.pca
 
org.openimaj.math.matrix.algorithm.whitening - package org.openimaj.math.matrix.algorithm.whitening
 
org.openimaj.math.matrix.similarity - package org.openimaj.math.matrix.similarity
 
org.openimaj.math.matrix.similarity.processor - package org.openimaj.math.matrix.similarity.processor
 
org.openimaj.math.model - package org.openimaj.math.model
 
org.openimaj.math.model.fit - package org.openimaj.math.model.fit
 
org.openimaj.math.model.fit.residuals - package org.openimaj.math.model.fit.residuals
 
org.openimaj.math.statistics - package org.openimaj.math.statistics
 
org.openimaj.math.statistics.distribution - package org.openimaj.math.statistics.distribution
 
org.openimaj.math.statistics.distribution.kernel - package org.openimaj.math.statistics.distribution.kernel
 
org.openimaj.math.statistics.distribution.metrics - package org.openimaj.math.statistics.distribution.metrics
 
org.openimaj.math.statistics.normalisation - package org.openimaj.math.statistics.normalisation
 
org.openimaj.math.util - package org.openimaj.math.util
 
org.openimaj.math.util.distance - package org.openimaj.math.util.distance
 
OrientationCheck2D<M extends Model<Point2d,Point2d> & MatrixTransformProvider> - Class in org.openimaj.math.geometry.transforms.check

Test whether a given model that produces a homogenous transform is
 orientation preserving

OrientationCheck2D() - Constructor for class org.openimaj.math.geometry.transforms.check.OrientationCheck2D
 
outliers - Variable in class org.openimaj.math.model.fit.LMedS
 
outliers - Variable in class org.openimaj.math.model.fit.RANSAC
 
outp - Variable in class org.openimaj.math.geometry.shape.util.polygon.EdgeNode

Output polygon / tristrip pointer

overlapping(Rectangle) - Method in class org.openimaj.math.geometry.shape.Rectangle

Get the overlapping rectangle between this rectangle and another.





P

packedHamming(double, double) - Static method in class org.openimaj.math.util.distance.HammingUtils

Bitwise (assuming packed bit strings) hamming distance

packedHamming(float, float) - Static method in class org.openimaj.math.util.distance.HammingUtils

Bitwise (assuming packed bit strings) hamming distance

packedHamming(long, long) - Static method in class org.openimaj.math.util.distance.HammingUtils

Bitwise (assuming packed bit strings) hamming distance

packedHamming(int, int) - Static method in class org.openimaj.math.util.distance.HammingUtils

Bitwise (assuming packed bit strings) hamming distance

packedHamming(byte, byte) - Static method in class org.openimaj.math.util.distance.HammingUtils

Bitwise (assuming packed bit strings) hamming distance

packedHamming(char, char) - Static method in class org.openimaj.math.util.distance.HammingUtils

Bitwise (assuming packed bit strings) hamming distance

packedHamming(short, short) - Static method in class org.openimaj.math.util.distance.HammingUtils

Bitwise (assuming packed bit strings) hamming distance

Path2d - Interface in org.openimaj.math.geometry.path

A Path2d represents an arbitrary path between 2 points in a 2D space.

payload(T, O) - Static method in class org.openimaj.math.geometry.point.PayloadCoordinate

Create a PayloadCoordinate.

PayloadCoordinate<T extends Coordinate,O> - Class in org.openimaj.math.geometry.point

A concrete implementation of a Coordinate that has an associated
 payload.

PayloadCoordinate(T, O) - Constructor for class org.openimaj.math.geometry.point.PayloadCoordinate

Construct with coordinate and payload.

pc - Variable in class org.openimaj.math.geometry.shape.PointDistributionModel
 
PCAWhitening - Class in org.openimaj.math.matrix.algorithm.whitening

Whitening based on PCA.

PCAWhitening(double, Normaliser) - Constructor for class org.openimaj.math.matrix.algorithm.whitening.PCAWhitening

Construct with the given variance regularization parameter and data
 normalisation strategy.

PCAWhitening(double, Normaliser, int) - Constructor for class org.openimaj.math.matrix.algorithm.whitening.PCAWhitening

Construct with the given variance regularization parameter, data
 normalisation strategy and target dimensionality.

PercentageEnergyComponentSelector(double) - Constructor for class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis.PercentageEnergyComponentSelector

Construct with the given percentage

PercentageInliersStoppingCondition(double) - Constructor for class org.openimaj.math.model.fit.RANSAC.PercentageInliersStoppingCondition

Construct the stopping condition with the given percentage threshold
 on the number of data points which must match for a model to be
 considered a fit.

percentageOverlap(Rectangle) - Method in class org.openimaj.math.geometry.shape.Rectangle

Compute the percentage by which the given rectangle overlaps this one.

PerExampleMeanCenter - Class in org.openimaj.math.statistics.normalisation

Subtract the mean of each example vector from itself to normalise the vector.

PerExampleMeanCenter() - Constructor for class org.openimaj.math.statistics.normalisation.PerExampleMeanCenter
 
PerExampleMeanCenterVar - Class in org.openimaj.math.statistics.normalisation

Subtract the mean of each example vector from itself and divide by the
 standard deviation to normalise the vector such that it has unit variance.

PerExampleMeanCenterVar(double) - Constructor for class org.openimaj.math.statistics.normalisation.PerExampleMeanCenterVar

Construct with the given variance regularisation term.

perform(Polyline) - Method in class org.openimaj.math.geometry.path.resample.LinearResampler

Apply the resampling operation in-place

perform(double[]) - Static method in class org.openimaj.math.matrix.GramSchmidtProcess
 
plus(Matrix, double) - Static method in class org.openimaj.math.matrix.MatrixUtils

Add a constant to all values

plusEquals(Matrix, Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Add a matrix to another inline.

plusEqualsRow(Matrix, Matrix, int[]) - Static method in class org.openimaj.math.matrix.MatrixUtils

Add the rows to the mat at rowIndex.

plusInplace(Matrix, double) - Static method in class org.openimaj.math.matrix.CFMatrixUtils

Add a constant to the matrix, returning the input matrix

plusInplace(SparseMatrix, Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Add two matrices, storing the results in the first:
 A = A + B

plusInplace(T, Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Add two matrices, storing the results in the first:
 A = A + B

plusInplace(T, double) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Add a constant inplace A = A + d

plusInplace(T, Vector) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Subtract a vector from another vector A = A + D

plusInplace(DiagonalMatrix, T) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Add two matrices, storing the results in the second:
 A = D + A

point - Variable in class org.openimaj.math.geometry.shape.util.polygon.ItNode

Point of intersection

Point2d - Interface in org.openimaj.math.geometry.point

Interface representing a point in 2d space with x and y coordinates.

Point2dImpl - Class in org.openimaj.math.geometry.point

Simple concrete implementation of a two dimensional point.

Point2dImpl(float, float) - Constructor for class org.openimaj.math.geometry.point.Point2dImpl

Construct a Point2dImpl with the given (x, y) coordinates

Point2dImpl(Point2d) - Constructor for class org.openimaj.math.geometry.point.Point2dImpl

Construct a Point2dImpl with the (x,y) coordinates given via another
 point.

Point2dImpl() - Constructor for class org.openimaj.math.geometry.point.Point2dImpl

Construct a Point2dImpl at the origin.

Point2dImpl(Coordinate) - Constructor for class org.openimaj.math.geometry.point.Point2dImpl

Construct a Point2dImpl using the first two ordinates of a
 Coordinate.

Point2dImpl(double, double) - Constructor for class org.openimaj.math.geometry.point.Point2dImpl

Construct a Point2dImpl with the given (x, y) coordinates.

Point3d - Interface in org.openimaj.math.geometry.point

Interface representing a point in 3d space with x and y coordinates

Point3dImpl - Class in org.openimaj.math.geometry.point

Simple concrete implementation of a three dimensional point.

Point3dImpl(double, double, double) - Constructor for class org.openimaj.math.geometry.point.Point3dImpl

Construct a Point3dImpl with the given (x, y, z) coordinates

Point3dImpl(double[]) - Constructor for class org.openimaj.math.geometry.point.Point3dImpl

Construct a Point3dImpl with the given (x, y, z) coordinates packed into
 an array

Point3dImpl(Point3d) - Constructor for class org.openimaj.math.geometry.point.Point3dImpl

Construct a Point3dImpl with the (x,y,z) coordinates given via another
 point.

Point3dImpl() - Constructor for class org.openimaj.math.geometry.point.Point3dImpl

Construct a Point3dImpl at the origin.

PointDistributionModel - Class in org.openimaj.math.geometry.shape

A 2d point distribution model learnt from a set of PointLists with
 corresponding points (the ith point in each PointList is the same
 landmark).

PointDistributionModel(List<PointList>) - Constructor for class org.openimaj.math.geometry.shape.PointDistributionModel

Construct a PointDistributionModel from the given data with a
 PointDistributionModel.NullConstraint.

PointDistributionModel(PointDistributionModel.Constraint, List<PointList>) - Constructor for class org.openimaj.math.geometry.shape.PointDistributionModel

Construct a PointDistributionModel from the given data and
 PointDistributionModel.Constraint.

PointDistributionModel.BoxConstraint - Class in org.openimaj.math.geometry.shape

A constraint that ensures that each individual element of the scaling
 vector is within +/- x standard deviations of the model.

PointDistributionModel.Constraint - Interface in org.openimaj.math.geometry.shape

Interface for modelling constraints applied to the scaling vector of
 PointDistributionModels so that generated models are plausible.

PointDistributionModel.EllipsoidConstraint - Class in org.openimaj.math.geometry.shape

Constrain the scaling vector to a hyper-ellipsoid.

PointDistributionModel.NullConstraint - Class in org.openimaj.math.geometry.shape

A constraint that does nothing.

PointList - Class in org.openimaj.math.geometry.point

A base implementation of a GeometricObject2d that is a set of
 points in space.

PointList(Point2d...) - Constructor for class org.openimaj.math.geometry.point.PointList

Construct a PointList from points

PointList(Collection<? extends Point2d>) - Constructor for class org.openimaj.math.geometry.point.PointList

Construct a PointList from points

PointList(Collection<? extends Point2d>, boolean) - Constructor for class org.openimaj.math.geometry.point.PointList

Construct a PointList from the points, possibly copying the
 points first

PointListConnections - Class in org.openimaj.math.geometry.point

Class to model the connections between points in a PointList.

PointListConnections() - Constructor for class org.openimaj.math.geometry.point.PointListConnections

Default constructor.

PointListConnections(PointList, List<Line2d>) - Constructor for class org.openimaj.math.geometry.point.PointListConnections

Construct with a PointList and a list of lines between points in
 the PointList.

points - Variable in class org.openimaj.math.geometry.point.PointList

The points in the PointList

points - Variable in class org.openimaj.math.matrix.similarity.processor.MultidimensionalScaling
 
Polygon - Class in org.openimaj.math.geometry.shape

A polygon, modelled as a list of vertices.

Polygon() - Constructor for class org.openimaj.math.geometry.shape.Polygon

Constructs an empty polygon to which vertices may be added.

Polygon(boolean) - Constructor for class org.openimaj.math.geometry.shape.Polygon

Constructs an empty polygon to which vertices may be added.

Polygon(Point2d...) - Constructor for class org.openimaj.math.geometry.shape.Polygon

Construct a Polygon from vertices

Polygon(Collection<? extends Point2d>) - Constructor for class org.openimaj.math.geometry.shape.Polygon

Construct a Polygon from vertices

Polygon(Collection<? extends Point2d>, boolean) - Constructor for class org.openimaj.math.geometry.shape.Polygon

Construct a Polygon from the vertices, possibly copying the vertices
 first

PolygonNode - Class in org.openimaj.math.geometry.shape.util.polygon

Internal contour / tristrip type

PolygonNode(PolygonNode, double, double) - Constructor for class org.openimaj.math.geometry.shape.util.polygon.PolygonNode
 
PolygonUtils - Class in org.openimaj.math.geometry.shape.util

PolygonUtils is a Java version of the General Polygon Clipper
 algorithm developed by Alan Murta (gpc@cs.man.ac.uk).

PolygonUtils() - Constructor for class org.openimaj.math.geometry.shape.util.PolygonUtils

Creates a new instance of PolygonUtils

Polyline - Class in org.openimaj.math.geometry.path

A polyline is a Path2d implicitly made up of Line2d segments
 based on the assumption of ordered points held in a PointList.

Polyline(Point2d...) - Constructor for class org.openimaj.math.geometry.path.Polyline

Construct a Polyline from points

Polyline(List<? extends Point2d>) - Constructor for class org.openimaj.math.geometry.path.Polyline

Construct a Polyline from points

Polyline(List<? extends Point2d>, boolean) - Constructor for class org.openimaj.math.geometry.path.Polyline

Construct a Polyline from the points, possibly copying the points
 first

Polyline(Iterator<Line2d>) - Constructor for class org.openimaj.math.geometry.path.Polyline

Construct a Polyline from line segments

pow(Matrix, double) - Static method in class org.openimaj.math.matrix.MatrixUtils

Return a copy of the matrix with all the values raised to a power.

powInplace(T, double) - Static method in class org.openimaj.math.matrix.CFMatrixUtils

Bring each element to the power d

powInplace(T, double) - Static method in class org.openimaj.math.matrix.CFMatrixUtils

Bring each element to the power d

powInplace(T, double) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Raise each element to the power d, operating on the matrix itself

predict(Point2d) - Method in class org.openimaj.math.geometry.transforms.AffineTransformModel
 
predict(Point3d) - Method in class org.openimaj.math.geometry.transforms.AffineTransformModel3d
 
predict(Point2d) - Method in class org.openimaj.math.geometry.transforms.FundamentalModel
 
predict(Point2d) - Method in class org.openimaj.math.geometry.transforms.HomographyModel
 
predict(T) - Method in class org.openimaj.math.geometry.transforms.NullModel
 
predict(double[]) - Method in class org.openimaj.math.model.GaussianVectorNaiveBayesModel
 
predict(Integer) - Method in class org.openimaj.math.model.LeastSquaresLinearModel
 
predict(I) - Method in interface org.openimaj.math.model.Model

Uses the model to predict dependent data from an independent value.

predict(Double) - Method in class org.openimaj.math.model.UnivariateGaussianNaiveBayesModel
 
predict(double[]) - Method in class org.openimaj.math.statistics.distribution.MixtureOfGaussians

Predict the class (the index of the most-probable gaussian) to which the
 given data point belongs.

predictLogPosterior(double[]) - Method in class org.openimaj.math.statistics.distribution.MixtureOfGaussians

Predict the log-posterior for the given sample; this is the
 log-probability of the sample point belonging to each of the gaussians in
 the mixture.

predictLogPosterior(double[][]) - Method in class org.openimaj.math.statistics.distribution.MixtureOfGaussians

Predict the log-posterior for the given samples; this is the
 log-probability of each sample point belonging to each of the gaussians
 in the mixture.

prev - Variable in class org.openimaj.math.geometry.shape.util.polygon.EdgeNode

Previous edge in the AET

prev - Variable in class org.openimaj.math.geometry.shape.util.polygon.StNode

Previous edge in sorted list

PREV_INDEX(int, int) - Static method in class org.openimaj.math.geometry.shape.util.PolygonUtils
 
PrincipalComponentAnalysis - Class in org.openimaj.math.matrix.algorithm.pca

Abstract base class for PCA implementations.

PrincipalComponentAnalysis() - Constructor for class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis
 
PrincipalComponentAnalysis.ComponentSelector - Interface in org.openimaj.math.matrix.algorithm.pca

Interface for classes capable of selecting a subset of the PCA components

PrincipalComponentAnalysis.EnergyThresholdComponentSelector - Class in org.openimaj.math.matrix.algorithm.pca

PrincipalComponentAnalysis.ComponentSelector that selects a subset of the principal
 components such that all remaining components have a cumulative energy
 less than the given value.

PrincipalComponentAnalysis.NumberComponentSelector - Class in org.openimaj.math.matrix.algorithm.pca

PrincipalComponentAnalysis.ComponentSelector that selects the n-best components.

PrincipalComponentAnalysis.PercentageEnergyComponentSelector - Class in org.openimaj.math.matrix.algorithm.pca

PrincipalComponentAnalysis.ComponentSelector that selects a subset of the principal
 components such that all remaining components have a certain percentage
 cumulative energy of the total.

print() - Method in class org.openimaj.math.geometry.shape.util.polygon.AetTree
 
print() - Method in class org.openimaj.math.geometry.shape.util.polygon.LmtTable
 
print() - Method in class org.openimaj.math.geometry.shape.util.polygon.TopPolygonNode
 
ProbabilisticMinInliersStoppingCondition(double, double, double) - Constructor for class org.openimaj.math.model.fit.RANSAC.ProbabilisticMinInliersStoppingCondition

Default constructor.

ProbabilisticMinInliersStoppingCondition(double) - Constructor for class org.openimaj.math.model.fit.RANSAC.ProbabilisticMinInliersStoppingCondition

Constructor with defaults for bad inlier probability and percentage
 inliers.

process(SimilarityMatrix) - Method in class org.openimaj.math.matrix.similarity.processor.InvertData
 
process(SimilarityMatrix) - Method in class org.openimaj.math.matrix.similarity.processor.MultidimensionalScaling
 
process(SimilarityMatrix) - Method in class org.openimaj.math.matrix.similarity.processor.NormaliseData
 
process(SimilarityMatrix) - Method in interface org.openimaj.math.matrix.similarity.processor.SimilarityMatrixProcessor

Process the SimilarityMatrix, making changes inplace.

process(SimilarityMatrix) - Method in class org.openimaj.math.matrix.similarity.processor.Threshold
 
process(SimilarityMatrixProcessor) - Method in class org.openimaj.math.matrix.similarity.SimilarityMatrix

Process a copy of this similarity matrix with the
 given processor and return the copy.

processInplace(SimilarityMatrixProcessor) - Method in class org.openimaj.math.matrix.similarity.SimilarityMatrix

Process this matrix with the given processor.

ProcrustesAnalysis - Class in org.openimaj.math.geometry.shape.algorithm

Ordinary Procrustes Analysis between two sets of corresponding
 PointLists.

ProcrustesAnalysis(PointList) - Constructor for class org.openimaj.math.geometry.shape.algorithm.ProcrustesAnalysis

Construct the ProcrustesAnalysis with the given
 reference shape.

ProcrustesAnalysis(PointList, boolean) - Constructor for class org.openimaj.math.geometry.shape.algorithm.ProcrustesAnalysis

Construct the ProcrustesAnalysis with the given
 reference shape.

project(Matrix) - Method in class org.openimaj.math.matrix.algorithm.LinearDiscriminantAnalysis

Project a matrix of row vectors by the basis.

project(double[]) - Method in class org.openimaj.math.matrix.algorithm.LinearDiscriminantAnalysis

Project a vector by the basis.

project(Matrix) - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis

Project a matrix of row vectors by the basis.

project(double[]) - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis

Project a vector by the basis.

pseudoInverse(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Computes the Moore-Penrose pseudoinverse.

PseudoInverse - Class in org.openimaj.math.matrix

Methods for calculating the Moore-Penrose Pseudo-Inverse

PseudoInverse() - Constructor for class org.openimaj.math.matrix.PseudoInverse
 
pseudoInverse(Matrix) - Static method in class org.openimaj.math.matrix.PseudoInverse

Compute the Moore-Penrose Pseudo-Inverse.

pseudoInverse(Matrix, int) - Static method in class org.openimaj.math.matrix.PseudoInverse

Compute the lower-rank approximation of the Moore-Penrose Pseudo-Inverse.

pseudoInverse(Matrix, int) - Static method in class org.openimaj.math.matrix.PseudoInverse

Compute the lower-rank approximation of the Moore-Penrose Pseudo-Inverse.

push(double) - Method in class org.openimaj.math.util.RunningStat

Push a data value from the stream into the calculation.

put(int, int, double) - Method in class org.openimaj.math.matrix.DiagonalMatrix
 
put(int, int, double) - Method in class org.openimaj.math.matrix.JamaDenseMatrix
 




Q

QuadraticEquation - Class in org.openimaj.math.util

Utility methods for dealing with quadratic equations.

QuadraticEquation() - Constructor for class org.openimaj.math.util.QuadraticEquation
 




R

radius - Variable in class org.openimaj.math.geometry.shape.Circle
 
randGaussian(int, int) - Static method in class org.openimaj.math.matrix.MatrixUtils

Generate a matrix with Gaussian distributed randoms

randomSparseCol(int, int, double, double, double, Random) - Static method in class org.openimaj.math.matrix.CFMatrixUtils

Create a random SparseColumnMatrix

randomSparseRow(int, int, double, double, double, Random) - Static method in class org.openimaj.math.matrix.CFMatrixUtils

Create a random SparseRowMatrix

range(double...) - Static method in class org.openimaj.math.matrix.MatrixUtils

range is: - a single number (a) (0:1:a) - two numbers (a,b) (a:1:b) -
 three numbers (a,b,c) (a:b:c)

range(int...) - Static method in class org.openimaj.math.matrix.MatrixUtils

range is: - a single number (a) (0:1:a) - two numbers (a,b) (a:1:b) -
 three numbers (a,b,c) (a:b:c)

rangePow(double, double...) - Static method in class org.openimaj.math.matrix.MatrixUtils

d to the power of each value in range.

RANSAC<I,D,M extends EstimatableModel<I,D>> - Class in org.openimaj.math.model.fit

The RANSAC Algorithm (RANdom SAmple Consensus)

RANSAC(M, ResidualCalculator<I, D, M>, double, int, RANSAC.StoppingCondition, boolean) - Constructor for class org.openimaj.math.model.fit.RANSAC

Create a RANSAC object with uniform random sampling for creating the
 subsets

RANSAC(M, ResidualCalculator<I, D, M>, DistanceCheck, int, RANSAC.StoppingCondition, boolean) - Constructor for class org.openimaj.math.model.fit.RANSAC

Create a RANSAC object with uniform random sampling for creating the
 subsets

RANSAC(M, ResidualCalculator<I, D, M>, double, int, RANSAC.StoppingCondition, boolean, CollectionSampler<IndependentPair<I, D>>) - Constructor for class org.openimaj.math.model.fit.RANSAC

Create a RANSAC object

RANSAC(M, ResidualCalculator<I, D, M>, DistanceCheck, int, RANSAC.StoppingCondition, boolean, CollectionSampler<IndependentPair<I, D>>) - Constructor for class org.openimaj.math.model.fit.RANSAC

Create a RANSAC object

RANSAC.BestFitStoppingCondition - Class in org.openimaj.math.model.fit

Stopping condition that allows the RANSAC algorithm to run until all the
 iterations have been exhausted.

RANSAC.NumberInliersStoppingCondition - Class in org.openimaj.math.model.fit

Stopping condition that tests the number of matches against a threshold.

RANSAC.PercentageInliersStoppingCondition - Class in org.openimaj.math.model.fit

Stopping condition that tests the number of matches against a percentage
 threshold of the whole data.

RANSAC.ProbabilisticMinInliersStoppingCondition - Class in org.openimaj.math.model.fit

Stopping condition that tests the number of matches against a percentage
 threshold of the whole data.

RANSAC.StoppingCondition - Interface in org.openimaj.math.model.fit

Interface for classes that can control RANSAC iterations

rate - Variable in class org.openimaj.math.matrix.similarity.processor.MultidimensionalScaling
 
re - Variable in class org.openimaj.math.util.Complex

The real part

readASCII(Scanner) - Method in class org.openimaj.math.geometry.point.AbstractPoint2d
 
readASCII(Scanner) - Method in class org.openimaj.math.geometry.point.PayloadCoordinate
 
readASCII(Scanner) - Method in class org.openimaj.math.geometry.point.Point2dImpl
 
readASCII(Scanner) - Method in class org.openimaj.math.geometry.point.Point3dImpl
 
readASCII(Scanner) - Method in class org.openimaj.math.geometry.shape.Rectangle
 
readASCII(Scanner) - Method in class org.openimaj.math.matrix.ReadWriteableMatrix
 
readASCII(Scanner) - Method in class org.openimaj.math.matrix.similarity.SimilarityMatrix
 
readBinary(DataInput) - Method in class org.openimaj.math.geometry.point.AbstractPoint2d
 
readBinary(DataInput) - Method in class org.openimaj.math.geometry.point.PayloadCoordinate
 
readBinary(DataInput) - Method in class org.openimaj.math.geometry.point.Point2dImpl
 
readBinary(DataInput) - Method in class org.openimaj.math.geometry.point.Point3dImpl
 
readBinary(DataInput) - Method in class org.openimaj.math.geometry.shape.Rectangle
 
readBinary(DataInput) - Method in class org.openimaj.math.matrix.ReadWriteableMatrix
 
readBinary(DataInput) - Method in class org.openimaj.math.matrix.similarity.SimilarityMatrix
 
ReadWriteableMatrix - Class in org.openimaj.math.matrix

A wrapper around a JAMA Matrix that is read-writeable by
 OpenIMAJ IOUtils.

ReadWriteableMatrix() - Constructor for class org.openimaj.math.matrix.ReadWriteableMatrix

Construct a new matrix of zero size.

ReadWriteableMatrix(double[][]) - Constructor for class org.openimaj.math.matrix.ReadWriteableMatrix

Construct a matrix using the provided 2-D double array.

ReadWriteableMatrix(int, int) - Constructor for class org.openimaj.math.matrix.ReadWriteableMatrix

Construct a new matrix of the given size

ReadWriteableMatrix(Matrix) - Constructor for class org.openimaj.math.matrix.ReadWriteableMatrix

Construct a matrix using the provided matrix.

Rectangle - Class in org.openimaj.math.geometry.shape

A rectangle shape oriented to the axes.

Rectangle() - Constructor for class org.openimaj.math.geometry.shape.Rectangle

Construct a unit rectangle

Rectangle(float, float, float, float) - Constructor for class org.openimaj.math.geometry.shape.Rectangle

Construct a Rectangle with the given parameters.

Rectangle(Rectangle) - Constructor for class org.openimaj.math.geometry.shape.Rectangle

Construct a Rectangle by copying from another rectangle.

Rectangle(Point2d, Point2d) - Constructor for class org.openimaj.math.geometry.shape.Rectangle

Construct a Rectangle with the given parameters.

Rectangle3D - Class in org.openimaj.math.geometry.shape

A rectangle in 3D space.

Rectangle3D() - Constructor for class org.openimaj.math.geometry.shape.Rectangle3D
 
RED - Static variable in class org.openimaj.math.geometry.shape.util.polygon.VertexType

Right edge

reduce() - Method in class org.openimaj.math.combinatorics.optimisation.HungarianAlgorithm

Reduce the cost matrix by subtracting the smallest element of each row
 from all elements of the row as well as the smallest element of each
 column from all elements of the column.

reduceRank(Matrix, int) - Static method in class org.openimaj.math.matrix.MatrixUtils

Reduce the rank a matrix by estimating a the best (in a least-squares
 sense) approximation using the thin SVD.

reduceRank(Matrix, int) - Static method in class org.openimaj.math.matrix.ThinSingularValueDecomposition

Reduce the rank of the input matrix using the thin SVD to get a lower
 rank least-squares estimate of the input.

reduceVertices(double) - Method in class org.openimaj.math.geometry.shape.Polygon

Reduce the number of vertices in a polygon.

reference - Variable in class org.openimaj.math.geometry.shape.algorithm.ProcrustesAnalysis
 
referenceCog - Variable in class org.openimaj.math.geometry.shape.algorithm.ProcrustesAnalysis
 
refine(Matrix, List<? extends IndependentPair<? extends Point2d, ? extends Point2d>>) - Method in enum org.openimaj.math.geometry.transforms.FundamentalRefinement

Refine an initial guess at the homography that takes the first points in
 data to the second using non-linear Levenberg Marquardt optimisation.

refine(Matrix, List<? extends IndependentPair<? extends Point2d, ? extends Point2d>>) - Method in enum org.openimaj.math.geometry.transforms.HomographyRefinement

Refine an initial guess at the homography that takes the first points in
 data to the second using non-linear Levenberg Marquardt optimisation.

reflectAroundLine(Point2d) - Method in class org.openimaj.math.geometry.line.Line2d

Reflects a point around a this line.

repmat(Matrix, int, int) - Static method in class org.openimaj.math.matrix.MatrixUtils

Given a matrix, repeat the matrix over i rows and j columns

reset() - Method in class org.openimaj.math.matrix.MeanVector
 
reshape(Matrix, int) - Static method in class org.openimaj.math.matrix.MatrixUtils

Get a reshaped copy of the input matrix

reshape(Matrix, int, boolean) - Static method in class org.openimaj.math.matrix.MatrixUtils

Get a reshaped copy of the input matrix

ResidualCalculator<I,D,M extends Model<I,D>> - Interface in org.openimaj.math.model.fit.residuals

Interface describing the computation of an error (the residuals) of a set of
 (independent and dependent) data points with respect to a model.

residualEstimator - Variable in class org.openimaj.math.model.fit.LMedS
 
REV_MIN(int) - Method in class org.openimaj.math.geometry.shape.util.polygon.EdgeTable
 
reverse(double[]) - Method in class org.openimaj.math.matrix.ThinSingularValueDecomposition
 
reverseColumns(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Create a copy of a matrix with the columns in reverse order.

reverseColumnsInplace(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Reverse the column order of the input matrix inplace.

reverseRows(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Create a copy of a matrix with the rows in reverse order.

reverseRowsInplace(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Reverse the row order of the input matrix inplace.

RIGHT - Static variable in class org.openimaj.math.geometry.shape.util.PolygonUtils

RIGHT

rigidMatrix(double[][], double[][]) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities

Compute the least-squares rigid alignment between two sets of matching
 points in N-dimensional space.

rigidMatrix(List<? extends IndependentPair<? extends Coordinate, ? extends Coordinate>>) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities

Compute the least-squares rigid alignment between two sets of matching
 points in N-dimensional space.

RigidTransformModel3d - Class in org.openimaj.math.geometry.transforms

Concrete implementation of a model of a 3D rigid transform with only rotation
 and translation allowed.

RigidTransformModel3d() - Constructor for class org.openimaj.math.geometry.transforms.RigidTransformModel3d

Create a RigidTransformModel3d

rng - Variable in class org.openimaj.math.matrix.similarity.processor.MultidimensionalScaling
 
RobustAffineTransformEstimator - Class in org.openimaj.math.geometry.transforms.estimation

Helper class to simplify robust estimation of 2D affine transforms without
 having to deal with the nuts and bolts of the underlying robust model
 fitters, etc.

RobustAffineTransformEstimator(double) - Constructor for class org.openimaj.math.geometry.transforms.estimation.RobustAffineTransformEstimator

Construct using the LMedS algorithm with the given expected
 outlier percentage

RobustAffineTransformEstimator(double, int, RANSAC.StoppingCondition) - Constructor for class org.openimaj.math.geometry.transforms.estimation.RobustAffineTransformEstimator

Construct using the RANSAC algorithm with the given options.

RobustAffineTransformEstimator(double, Predicate<AffineTransformModel>) - Constructor for class org.openimaj.math.geometry.transforms.estimation.RobustAffineTransformEstimator

Construct using the LMedS algorithm with the given expected
 outlier percentage

RobustAffineTransformEstimator(double, int, RANSAC.StoppingCondition, Predicate<AffineTransformModel>) - Constructor for class org.openimaj.math.geometry.transforms.estimation.RobustAffineTransformEstimator

Construct using the RANSAC algorithm with the given options.

RobustFundamentalEstimator - Class in org.openimaj.math.geometry.transforms.estimation

Helper class to simplify robust estimation of the Fundamental matrix without
 having to deal with the nuts and bolts of the underlying robust model
 fitters, etc.

RobustFundamentalEstimator(double, FundamentalRefinement) - Constructor for class org.openimaj.math.geometry.transforms.estimation.RobustFundamentalEstimator

Construct using the LMedS algorithm with the given expected
 outlier percentage

RobustFundamentalEstimator(double, int, RANSAC.StoppingCondition, FundamentalRefinement) - Constructor for class org.openimaj.math.geometry.transforms.estimation.RobustFundamentalEstimator

Construct using the RANSAC algorithm with the given options.

RobustHomographyEstimator - Class in org.openimaj.math.geometry.transforms.estimation

Helper class to simplify robust estimation of homographies without having to
 deal with the nuts and bolts of the underlying robust model fitters, etc.

RobustHomographyEstimator(double, HomographyRefinement) - Constructor for class org.openimaj.math.geometry.transforms.estimation.RobustHomographyEstimator

Construct using the LMedS algorithm with the given expected
 outlier percentage

RobustHomographyEstimator(double, int, RANSAC.StoppingCondition, HomographyRefinement) - Constructor for class org.openimaj.math.geometry.transforms.estimation.RobustHomographyEstimator

Construct using the RANSAC algorithm with the given options.

RobustHomographyEstimator(double, HomographyRefinement, Predicate<HomographyModel>) - Constructor for class org.openimaj.math.geometry.transforms.estimation.RobustHomographyEstimator

Construct using the LMedS algorithm with the given expected
 outlier percentage

RobustHomographyEstimator(double, int, RANSAC.StoppingCondition, HomographyRefinement, Predicate<HomographyModel>) - Constructor for class org.openimaj.math.geometry.transforms.estimation.RobustHomographyEstimator

Construct using the RANSAC algorithm with the given options.

RobustModelFitting<I,D,M extends Model<I,D>> - Interface in org.openimaj.math.model.fit

RobustModelFitting is an interface for fitting models that are able to
 distinguish between inliers and outliers in the training data.

rodrigues(Matrix) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities

Convert a 3D rotation matrix to a Rodrigues rotation vector, which is
 oriented along the rotation axis, and has magnitude equal to the rotation
 angle.

rodrigues(double[]) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities

Convert a Rodrigues rotation vector to a rotation matrix.

rotate(Point2d, double) - Method in class org.openimaj.math.geometry.point.PointList

Rotate the PointList about the given origin with the given angle
 (in radians)

rotate(double) - Method in class org.openimaj.math.geometry.point.PointList

Rotate the PointList about (0,0) with the given angle (in
 radians)

rotate - Variable in class org.openimaj.math.geometry.shape.algorithm.ProcrustesAnalysis
 
rotate(Point2d, double) - Method in class org.openimaj.math.geometry.shape.Rectangle

Rotate the Rectangle about the given pivot with the given angle
 (in radians)

RotatedRectangle - Class in org.openimaj.math.geometry.shape

A rectangle rotated by an angle.

RotatedRectangle(Rectangle, float) - Constructor for class org.openimaj.math.geometry.shape.RotatedRectangle

Construct with a regular Rectangle rotated about its centroid

RotatedRectangle(double, double, double, double, double) - Constructor for class org.openimaj.math.geometry.shape.RotatedRectangle

Construct with the given parameters

RotatedRectangle(float, float, float, float, float) - Constructor for class org.openimaj.math.geometry.shape.RotatedRectangle

Construct with the given parameters

RotatingCalipers - Class in org.openimaj.math.geometry.shape.util

Rotating calipers algorithm, based on the implementation by Bart Kiers.

RotatingCalipers() - Constructor for class org.openimaj.math.geometry.shape.util.RotatingCalipers
 
RotatingCalipers.Caliper - Class in org.openimaj.math.geometry.shape.util
 
RotatingCalipers.Corner - Enum in org.openimaj.math.geometry.shape.util
 
rotation - Variable in class org.openimaj.math.geometry.shape.RotatedRectangle

The rotation angle in radians

rotationMatrix(double) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities

Construct a rotation about 0, 0.

rotationMatrixAboutPoint(double, float, float) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities

Construct a rotation about the centre of the rectangle defined by width
 and height (i.e.

round(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

round (using Math.round(double) each value of the matrix

roundVertices() - Method in class org.openimaj.math.geometry.shape.Polygon

Iterates through the vertices and rounds all vertices to round integers.

rowCount() - Method in class org.openimaj.math.matrix.DiagonalMatrix
 
rowCount() - Method in class org.openimaj.math.matrix.JamaDenseMatrix
 
rowMean(Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils
 
rowSparsity(Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils

Compute the proportion of completely zero rows to rows with non-zero
 values

RunningStat - Class in org.openimaj.math.util

This class is used for providing a running mean and variance of streams of
 data.

RunningStat() - Constructor for class org.openimaj.math.util.RunningStat

Default constructor

RunningStat(double) - Constructor for class org.openimaj.math.util.RunningStat

Constructor that takes the first value





S

S - Variable in class org.openimaj.math.matrix.ThinSingularValueDecomposition

The singular values

sample(int) - Method in class org.openimaj.math.geometry.transforms.estimation.sampling.BucketingSampler2d
 
sample(int, Random) - Method in class org.openimaj.math.statistics.distribution.AbstractMultivariateDistribution
 
sample(Random) - Method in class org.openimaj.math.statistics.distribution.AbstractMultivariateGaussian
 
sample(int, Random) - Method in class org.openimaj.math.statistics.distribution.AbstractMultivariateGaussian
 
sample(Random) - Method in class org.openimaj.math.statistics.distribution.CachingMultivariateGaussian
 
sample(int, Random) - Method in class org.openimaj.math.statistics.distribution.CachingMultivariateGaussian
 
sample(int, Random) - Method in class org.openimaj.math.statistics.distribution.DiagonalMultivariateGaussian
 
sample(Random) - Method in interface org.openimaj.math.statistics.distribution.kernel.UnivariateKernel

Draw a sample from the kernel's underlying distribution

sample(Random) - Method in class org.openimaj.math.statistics.distribution.MixtureOfGaussians
 
sample(int, Random) - Method in class org.openimaj.math.statistics.distribution.MixtureOfGaussians
 
sample(int, Random) - Method in interface org.openimaj.math.statistics.distribution.MultivariateDistribution

Sample the distribution.

sample(Random) - Method in interface org.openimaj.math.statistics.distribution.MultivariateDistribution

Sample the distribution.

sample(Random) - Method in class org.openimaj.math.statistics.distribution.MultivariateKernelDensityEstimate
 
SampledMultivariateDistanceComparator - Class in org.openimaj.math.statistics.distribution.metrics

By sampling a distribution and calculating the log liklihood 
 of those samples against another distribution, construct a distance metric.

SampledMultivariateDistanceComparator() - Constructor for class org.openimaj.math.statistics.distribution.metrics.SampledMultivariateDistanceComparator
 
SampledMultivariateDistanceComparator(int) - Constructor for class org.openimaj.math.statistics.distribution.metrics.SampledMultivariateDistanceComparator
 
SampledMultivariateDistanceComparator(long, int) - Constructor for class org.openimaj.math.statistics.distribution.metrics.SampledMultivariateDistanceComparator
 
sampler - Variable in class org.openimaj.math.model.fit.LMedS
 
sampler - Variable in class org.openimaj.math.model.fit.RANSAC
 
SampsonGeometricResidual() - Constructor for class org.openimaj.math.geometry.transforms.FundamentalModel.SampsonGeometricResidual
 
sb_tree - Variable in class org.openimaj.math.geometry.shape.util.polygon.ScanBeamTreeEntries
 
sbt_entries - Variable in class org.openimaj.math.geometry.shape.util.polygon.ScanBeamTreeEntries
 
scale(float) - Method in interface org.openimaj.math.geometry.GeometricObject2d

Scale the shape by the given amount about (0,0).

scale(Point2d, float) - Method in interface org.openimaj.math.geometry.GeometricObject2d

Scale the shape by the given amount about the given point.

scale(float) - Method in class org.openimaj.math.geometry.line.Line2d
 
scale(Point2d, float) - Method in class org.openimaj.math.geometry.line.Line2d
 
scale(float) - Method in class org.openimaj.math.geometry.point.PointList

Scale the PointList by the given amount about (0,0).

scale(Point2d, float) - Method in class org.openimaj.math.geometry.point.PointList

Scale the PointList by the given amount about the given point.

scale(float) - Method in class org.openimaj.math.geometry.shape.Circle
 
scale(Point2d, float) - Method in class org.openimaj.math.geometry.shape.Circle
 
scale(float) - Method in class org.openimaj.math.geometry.shape.Ellipse
 
scale(Point2d, float) - Method in class org.openimaj.math.geometry.shape.Ellipse
 
scale(float) - Method in class org.openimaj.math.geometry.shape.Polygon

Scale the polygon by the given amount about (0,0).

scale(Point2d, float) - Method in class org.openimaj.math.geometry.shape.Polygon

Scale the polygon by the given amount about the given point.

scale(float) - Method in class org.openimaj.math.geometry.shape.Rectangle
 
scale(Point2d, float) - Method in class org.openimaj.math.geometry.shape.Rectangle
 
scale(float) - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
 
scale(Point2d, float) - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
 
scale(float) - Method in class org.openimaj.math.geometry.shape.Triangle
 
scale(Point2d, float) - Method in class org.openimaj.math.geometry.shape.Triangle
 
scaleCentroid(float) - Method in interface org.openimaj.math.geometry.GeometricObject2d

Scale the shape about its centroid.

scaleCentroid(float) - Method in class org.openimaj.math.geometry.line.Line2d
 
scaleCentroid(float) - Method in class org.openimaj.math.geometry.point.PointList

Scale the PointList about its centre of gravity.

scaleCentroid(float) - Method in class org.openimaj.math.geometry.shape.Circle
 
scaleCentroid(float) - Method in class org.openimaj.math.geometry.shape.Ellipse
 
scaleCentroid(float) - Method in class org.openimaj.math.geometry.shape.Rectangle
 
scaleCentroid(float) - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
 
scaleCentroid(float) - Method in class org.openimaj.math.geometry.shape.Triangle
 
scaleInplace(T, double) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

A = A .

scaleMatrix(double, double) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities

Construct a homogeneous scaling transform with the given amounts of
 scaling.

scaleMatrixAboutPoint(double, double, int, int) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities

Create a scaling centered around a point.

scaleMatrixAboutPoint(double, double, Point2d) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities

Create a scaling centered around a point.

scaleX(float) - Method in class org.openimaj.math.geometry.point.PointList

Scale the PointList only in the x-direction by the given amount
 about (0,0).

scaleX(float) - Method in class org.openimaj.math.geometry.shape.Polygon

Scale the polygon only in the x-direction by the given amount about
 (0,0).

scaleXY(float, float) - Method in class org.openimaj.math.geometry.point.PointList

Scale the PointList by the given amount about (0,0).

scaleXY(float, float) - Method in class org.openimaj.math.geometry.shape.Polygon

Scale the polygon by the given amount about (0,0).

scaleY(float) - Method in class org.openimaj.math.geometry.point.PointList

Scale the PointList only in the y-direction by the given amount
 about (0,0).

scaleY(float) - Method in class org.openimaj.math.geometry.shape.Polygon

Scale the polygon only in the y-direction by the given amount about
 (0,0).

scaling - Variable in class org.openimaj.math.geometry.shape.algorithm.ProcrustesAnalysis
 
ScanBeamTree - Class in org.openimaj.math.geometry.shape.util.polygon

Scanbeam tree

ScanBeamTree(double) - Constructor for class org.openimaj.math.geometry.shape.util.polygon.ScanBeamTree
 
ScanBeamTreeEntries - Class in org.openimaj.math.geometry.shape.util.polygon
 
ScanBeamTreeEntries() - Constructor for class org.openimaj.math.geometry.shape.util.polygon.ScanBeamTreeEntries
 
scoreSamples(double[][]) - Method in class org.openimaj.math.statistics.distribution.MixtureOfGaussians

Compute the posterior distribution of the samples, and the overall log
 probability of each sample as belonging to the model.

secondMomentsAndScale() - Method in class org.openimaj.math.geometry.shape.Ellipse
 
secondVertex() - Method in class org.openimaj.math.geometry.shape.Triangle
 
select(PrincipalComponentAnalysis) - Method in interface org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis.ComponentSelector

Select a subset of principal components, discarding the ones not
 selected

select(PrincipalComponentAnalysis) - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis.EnergyThresholdComponentSelector
 
select(PrincipalComponentAnalysis) - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis.NumberComponentSelector
 
select(PrincipalComponentAnalysis) - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis.PercentageEnergyComponentSelector
 
selectSubset(PrincipalComponentAnalysis.ComponentSelector) - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis

Select a subset of the principal components using a
 PrincipalComponentAnalysis.ComponentSelector.

selectSubset(int) - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis

Select a subset of the principal components.

selectSubsetEnergyThreshold(double) - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis

Select a subset of the principal components such that all remaining
 components have a cumulative energy less than the given value.

selectSubsetPercentageEnergy(double) - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis

Select a subset of the principal components such that all remaining
 components have a certain percentage cumulative energy of the total.

setBeginPoint(Point2d) - Method in class org.openimaj.math.geometry.line.Line2d

Set the start point

setBounds(float, float, float, float) - Method in class org.openimaj.math.geometry.shape.Rectangle

Set the position and size of this rectangle

setCollection(Collection<? extends IndependentPair<Point2d, Point2d>>) - Method in class org.openimaj.math.geometry.transforms.estimation.sampling.BucketingSampler2d
 
setColumn(Matrix, int, double) - Static method in class org.openimaj.math.matrix.MatrixUtils

Set the values of the elements in a single column to a constant value.

setData(int, int, double[][]) - Method in class org.openimaj.math.matrix.ReadWriteableMatrix
 
setEndPoint(Point2d) - Method in class org.openimaj.math.geometry.line.Line2d

Set the end point

setEndPoint() - Method in class org.openimaj.math.geometry.line.Line2d

Get the end point

setF(Matrix) - Method in class org.openimaj.math.geometry.transforms.FundamentalModel

Set the Fundamental matrix

setIM(double) - Method in class org.openimaj.math.util.Complex

Set the imaginary part.

setImproveEstimate(boolean) - Method in class org.openimaj.math.model.fit.RANSAC

Set whether RANSAC should attempt to improve the model using all inliers
 as data

setIndexValue(int, String) - Method in class org.openimaj.math.matrix.similarity.SimilarityMatrix

Set the value of the index at a given offset

setIsHole(boolean) - Method in class org.openimaj.math.geometry.shape.Polygon

Set whether this polygon represents a hole in another polygon.

setMaxIterations(int) - Method in class org.openimaj.math.model.fit.RANSAC

Set the maximum number of allowed iterations

setModel(M) - Method in class org.openimaj.math.geometry.transforms.residuals.AlgebraicResidual2d
 
setModel(M) - Method in class org.openimaj.math.geometry.transforms.residuals.SingleImageTransferResidual2d
 
setModel(M) - Method in class org.openimaj.math.geometry.transforms.residuals.SymmetricTransferResidual2d
 
setModel(M) - Method in class org.openimaj.math.geometry.transforms.residuals.TransformedSITR2d
 
setModel(M) - Method in class org.openimaj.math.model.fit.RANSAC

Set the underlying model being fitted

setModel(M) - Method in class org.openimaj.math.model.fit.residuals.AbstractResidualCalculator
 
setModel(M) - Method in interface org.openimaj.math.model.fit.residuals.ResidualCalculator

Set the current model being evaluated.

setModelConstructionData(List<? extends IndependentPair<I, D>>) - Method in class org.openimaj.math.model.fit.RANSAC

Set the data used to construct the model

setNumComponents(int) - Method in class org.openimaj.math.geometry.shape.PointDistributionModel

Set the number of components of the PDM

setNumComponents(PrincipalComponentAnalysis.ComponentSelector) - Method in class org.openimaj.math.geometry.shape.PointDistributionModel

Set the number of components of the PDM using a PrincipalComponentAnalysis.ComponentSelector
 .

setOrdinate(int, Number) - Method in interface org.openimaj.math.geometry.point.Coordinate

Set the ordinate value for a specific dimension.

setOrdinate(int, Number) - Method in class org.openimaj.math.geometry.point.PayloadCoordinate
 
setOrdinate(int, Number) - Method in class org.openimaj.math.geometry.point.Point2dImpl
 
setOrdinate(int, Number) - Method in class org.openimaj.math.geometry.point.Point3dImpl
 
setPayload(O) - Method in class org.openimaj.math.geometry.point.PayloadCoordinate

Set the payload.

setRadius(float) - Method in class org.openimaj.math.geometry.shape.Circle

Set the radius of the circle.

setRE(double) - Method in class org.openimaj.math.util.Complex

Set the real part.

setRow(Matrix, int, double) - Static method in class org.openimaj.math.matrix.MatrixUtils

Set the values of the elements in a single column to a constant value.

setSubMatrix(Matrix, int, int, Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Set a submatrix of a larger matrix

setSubMatrixCol(Matrix, int, int, Vector) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Starting from a given row of a column, set the values of a matrix to the
 values of v

setSubMatrixRow(Matrix, int, int, Vector) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Starting from a given column of a row, set the values of a matrix to the
 values of v

setSubVector(Vector, int, Vector) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
 
setTransform(Matrix) - Method in class org.openimaj.math.geometry.transforms.HomographyModel

Set the transform matrix to the new one

setValues(Matrix) - Method in class org.openimaj.math.matrix.EigenValueVectorPair

Set the Eigen values

setVectors(Matrix) - Method in class org.openimaj.math.matrix.EigenValueVectorPair

Set the Eigen vectors

setX(float) - Method in class org.openimaj.math.geometry.point.AbstractPoint2d
 
setX(float) - Method in interface org.openimaj.math.geometry.point.Point2d

Set x coordinate of point

setX(float) - Method in class org.openimaj.math.geometry.point.Point2dImpl
 
setX(double) - Method in interface org.openimaj.math.geometry.point.Point3d

Set x coordinate of point

setX(double) - Method in class org.openimaj.math.geometry.point.Point3dImpl
 
setX(float) - Method in class org.openimaj.math.geometry.shape.Circle

Set the x-ordinate of the centre of the circle.

setY(float) - Method in class org.openimaj.math.geometry.point.AbstractPoint2d
 
setY(float) - Method in interface org.openimaj.math.geometry.point.Point2d

Set y coordinate of point

setY(float) - Method in class org.openimaj.math.geometry.point.Point2dImpl
 
setY(double) - Method in interface org.openimaj.math.geometry.point.Point3d

Set y coordinate of point

setY(double) - Method in class org.openimaj.math.geometry.point.Point3dImpl
 
setY(float) - Method in class org.openimaj.math.geometry.shape.Circle

Set the y-ordinate of the centre of the circle.

setZ(double) - Method in interface org.openimaj.math.geometry.point.Point3d

Set z coordinate of point

setZ(double) - Method in class org.openimaj.math.geometry.point.Point3dImpl
 
Shape - Interface in org.openimaj.math.geometry.shape

Interface for classes that represent a shape.

sharesVertex(Triangle) - Method in class org.openimaj.math.geometry.shape.Triangle

Test whether this triangle shares a vertex with another triangle.

shouldStopIterations(int) - Method in class org.openimaj.math.model.fit.RANSAC.BestFitStoppingCondition
 
shouldStopIterations(int) - Method in class org.openimaj.math.model.fit.RANSAC.NumberInliersStoppingCondition
 
shouldStopIterations(int) - Method in class org.openimaj.math.model.fit.RANSAC.ProbabilisticMinInliersStoppingCondition
 
shouldStopIterations(int) - Method in interface org.openimaj.math.model.fit.RANSAC.StoppingCondition

Should we stop iterating and return the model?

sign(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

For each element of X, sign(X) returns 1 if the element is greater than
 zero, 0 if it equals zero and -1 if it is less than zero.

SimilarityMatrix - Class in org.openimaj.math.matrix.similarity

A similarity matrix is a square matrix with an associated index.

SimilarityMatrix() - Constructor for class org.openimaj.math.matrix.similarity.SimilarityMatrix

Construct an empty similarity matrix.

SimilarityMatrix(int) - Constructor for class org.openimaj.math.matrix.similarity.SimilarityMatrix

Construct a similarity matrix with the given size
 and allocate the index accordingly.

SimilarityMatrix(String[]) - Constructor for class org.openimaj.math.matrix.similarity.SimilarityMatrix

Construct a similarity matrix with the given index
 and set the matrix size based on the index length.

SimilarityMatrix(String[], Matrix) - Constructor for class org.openimaj.math.matrix.similarity.SimilarityMatrix

Construct a similarity matrix based on the given index
 and matrix.

SimilarityMatrix(String[], double[][]) - Constructor for class org.openimaj.math.matrix.similarity.SimilarityMatrix

Construct a similarity matrix based on the given index
 and matrix data.

SimilarityMatrixProcessor - Interface in org.openimaj.math.matrix.similarity.processor

A class for processing a SimilarityMatrix.

SimpleEdge<VERTEX> - Class in org.openimaj.math.graph

A simple representation of a graph edge with public accessors
 for fast access.

SimpleEdge() - Constructor for class org.openimaj.math.graph.SimpleEdge
 
SimpleModelFitting<I,D,M extends EstimatableModel<I,D>> - Class in org.openimaj.math.model.fit

Example robust fitting, that simply wraps the models estimate method.

SimpleModelFitting(M, ResidualCalculator<I, D, M>, double) - Constructor for class org.openimaj.math.model.fit.SimpleModelFitting

Creates a SimpleModelFitting object to fit data to a model

SimpleModelFitting(M, ResidualCalculator<I, D, M>, DistanceCheck) - Constructor for class org.openimaj.math.model.fit.SimpleModelFitting

Creates a SimpleModelFitting object to fit data to a model

SimpleWeightedEdge<VERTEX> - Class in org.openimaj.math.graph

A simple weighted edge representation

SimpleWeightedEdge() - Constructor for class org.openimaj.math.graph.SimpleWeightedEdge
 
SingleImageTransferResidual2d<M extends Model<Point2d,Point2d>> - Class in org.openimaj.math.geometry.transforms.residuals

Compute the 2d geometric Single Image Transfer residual.

SingleImageTransferResidual2d() - Constructor for class org.openimaj.math.geometry.transforms.residuals.SingleImageTransferResidual2d
 
size() - Method in class org.openimaj.math.geometry.point.PointList
 
solve(double[], double[], double[]) - Static method in class org.openimaj.math.geometry.transforms.FundamentalRefinement.FastSolveNormal3x2

Solve the over-determined system [r1 r2]x = [r3] where r1, r2 and r3
 are 3-dimensional column vectors and x is a 2 dimensional column
 vector x=[r; s].

solveGeneralQuadratic(float, float, float) - Static method in class org.openimaj.math.util.QuadraticEquation

Solve the general quadratic ax^2 + bx + c = 0

solveGeneralQuadratic(double, double, double) - Static method in class org.openimaj.math.util.QuadraticEquation

Solve the general quadratic ax^2 + bx + c = 0

solveHomogeneousSystem(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Solves the system Ax = 0, returning the vector x as an
 array.

solveHomogeneousSystem(double[][]) - Static method in class org.openimaj.math.matrix.MatrixUtils

Solves the system Ax = 0, returning the vector x as an
 array.

solveHomogeneousSystem(DenseMatrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Solves the system Ax = 0, returning the vector x as an
 array.

sparseVectorToSparseArray(SparseVector) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Convert a SparseVector to a
 SparseDoubleArray.

sparsity(Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils

Compute the sparsity

sparsity(Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Compute the matrix sparsity (i.e.

sparsity(SparseMatrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Compute the sparsity (i.e.

SphericalMultivariateGaussian - Class in org.openimaj.math.statistics.distribution

Implementation of a spherical MultivariateGaussian (diagonal
 covariance matrix with equal values).

SphericalMultivariateGaussian(Matrix, double) - Constructor for class org.openimaj.math.statistics.distribution.SphericalMultivariateGaussian

Construct the Gaussian with the provided center and covariance

SphericalMultivariateGaussian(int) - Constructor for class org.openimaj.math.statistics.distribution.SphericalMultivariateGaussian

Construct the Gaussian with the zero mean and unit variance

sqrt(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Compute the principle square root, X, of the matrix A such that A=X*X

standardDeviation() - Method in class org.openimaj.math.util.RunningStat

Returns the running standard deviation

StandardUnivariateKernels - Enum in org.openimaj.math.statistics.distribution.kernel

Standard univariate (1-d) kernel (window) implementations

start - Variable in class org.openimaj.math.geometry.shape.algorithm.ConvexityDefect

The starting point on the convex hull

std(double[][]) - Static method in class org.openimaj.math.util.DoubleArrayStatsUtils

Calculate the sample standard deviation of a 2D array.

std(double[]) - Static method in class org.openimaj.math.util.DoubleArrayStatsUtils

Calculate the sample standard deviation of a 1D array.

std(float[][]) - Static method in class org.openimaj.math.util.FloatArrayStatsUtils

Calculate the standard deviation of a 2D array.

std(float[]) - Static method in class org.openimaj.math.util.FloatArrayStatsUtils

Calculate the standard deviation of a 1D array.

StNode - Class in org.openimaj.math.geometry.shape.util.polygon

Sorted edge table

StNode(EdgeNode, StNode) - Constructor for class org.openimaj.math.geometry.shape.util.polygon.StNode
 
stoppingCondition - Variable in class org.openimaj.math.model.fit.RANSAC
 
SUBJ - Static variable in class org.openimaj.math.geometry.shape.util.PolygonUtils

SUBJ

subMatrix(T, int, int, int, int) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Extract the submatrix of the same type of mat

subMatrix(T, TIntCollection, TIntCollection) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Extract a submatrix from the given rows and cols

subMatrix(T, TIntArrayList, int, int) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
 
subMatrix(T, int, int, TIntArrayList) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
 
succ - Variable in class org.openimaj.math.geometry.shape.util.polygon.EdgeNode

Edge connected at the upper end

sum(Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils

Sum the matrix entries

sum(DiagonalMatrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Sum the diagonal of the given matrix

sum(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Compute the sum of all elements of the matrix.

sum(double[][]) - Static method in class org.openimaj.math.util.DoubleArrayStatsUtils

Calculate the sum of a 2D array.

sum(double[]) - Static method in class org.openimaj.math.util.DoubleArrayStatsUtils

Calculate the sum of a 1D array.

sum(float[][]) - Static method in class org.openimaj.math.util.FloatArrayStatsUtils

Calculate the sum of a 2D array.

sum(float[]) - Static method in class org.openimaj.math.util.FloatArrayStatsUtils

Calculate the sum of a 1D array.

sumAbs(double[][]) - Static method in class org.openimaj.math.util.DoubleArrayStatsUtils

Calculate the sum of the absolute values of a 2D array.

sumAbs(double[]) - Static method in class org.openimaj.math.util.DoubleArrayStatsUtils

Calculate the sum the absolute values of a 1D array.

sumAbs(float[][]) - Static method in class org.openimaj.math.util.FloatArrayStatsUtils

Calculate the sum of the absolute values of a 2D array.

sumAbs(float[]) - Static method in class org.openimaj.math.util.FloatArrayStatsUtils

Calculate the sum the absolute values of a 1D array.

sumCols(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Compute the sum of values in all cols

sumColumn(Matrix, int) - Static method in class org.openimaj.math.matrix.MatrixUtils

Compute the sum of values in a single column

sumRow(Matrix, int) - Static method in class org.openimaj.math.matrix.MatrixUtils

Compute the sum of values in a single row

sumRows(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Compute the sum of values in all rows

sumSq(double[][]) - Static method in class org.openimaj.math.util.DoubleArrayStatsUtils

Calculate the sum of the squared values of a 2D array.

sumSq(double[]) - Static method in class org.openimaj.math.util.DoubleArrayStatsUtils

Calculate the sum the squared values of a 1D array.

sumSq(float[][]) - Static method in class org.openimaj.math.util.FloatArrayStatsUtils

Calculate the sum of the squared values of a 2D array.

sumSq(float[]) - Static method in class org.openimaj.math.util.FloatArrayStatsUtils

Calculate the sum the squared values of a 1D array.

SvdPrincipalComponentAnalysis - Class in org.openimaj.math.matrix.algorithm.pca

Compute the PCA using an SVD without actually constructing the covariance
 matrix.

SvdPrincipalComponentAnalysis() - Constructor for class org.openimaj.math.matrix.algorithm.pca.SvdPrincipalComponentAnalysis

Construct a SvdPrincipalComponentAnalysis that will extract all
 the eigenvectors.

SvdPrincipalComponentAnalysis(int) - Constructor for class org.openimaj.math.matrix.algorithm.pca.SvdPrincipalComponentAnalysis

Construct a SvdPrincipalComponentAnalysis that will extract the n
 best eigenvectors.

symmetricEig2x2(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Compute the real Eigen decomposition of a symmetric 2x2 matrix.

symmetricGeneralisedEigenvalues(DenseMatrix, DenseMatrix) - Static method in class org.openimaj.math.matrix.GeneralisedEigenvalueProblem

Compute the generalised eigenvalues, L, of the problem A x = L B x.

symmetricGeneralisedEigenvalues(Matrix, Matrix) - Static method in class org.openimaj.math.matrix.GeneralisedEigenvalueProblem

Compute the generalised eigenvalues, L, of the problem A x = L B x.

symmetricGeneralisedEigenvectors(DenseMatrix, DenseMatrix) - Static method in class org.openimaj.math.matrix.GeneralisedEigenvalueProblem

Solve the general problem A x = L B x.

symmetricGeneralisedEigenvectors(Matrix, Matrix) - Static method in class org.openimaj.math.matrix.GeneralisedEigenvalueProblem

Solve the general problem A x = L B x.

symmetricGeneralisedEigenvectorsSorted(Matrix, Matrix) - Static method in class org.openimaj.math.matrix.GeneralisedEigenvalueProblem

Solve the general problem A x = L B x.

symmetricGeneralisedEigenvectorsSorted(Matrix, Matrix, int) - Static method in class org.openimaj.math.matrix.GeneralisedEigenvalueProblem

Solve the general problem A x = L B x.

SymmetricTransferResidual2d<M extends Model<Point2d,Point2d> & MatrixTransformProvider> - Class in org.openimaj.math.geometry.transforms.residuals

The points in the first image are projected by the homography matrix to
 produce new estimates of the second image points and the second image point
 projected by the inverse homography to produce estimates of the first.

SymmetricTransferResidual2d() - Constructor for class org.openimaj.math.geometry.transforms.residuals.SymmetricTransferResidual2d
 




T

tanh(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Return a copy of the input matrix where every value is the hyperbolic
 tangent of the elements.

TED - Static variable in class org.openimaj.math.geometry.shape.util.polygon.VertexType

Top edge

test(M) - Method in class org.openimaj.math.geometry.transforms.check.ConvexityCheck2D
 
test(M) - Method in class org.openimaj.math.geometry.transforms.check.OrientationCheck2D
 
test(M) - Method in class org.openimaj.math.geometry.transforms.check.TransformMatrixConditionCheck
 
TH - Static variable in class org.openimaj.math.geometry.shape.util.polygon.HState

Top horizontal edge

ThinSingularValueDecomposition - Class in org.openimaj.math.matrix

Thin SVD based on Adrian Kuhn's wrapper around ARPACK.

ThinSingularValueDecomposition(Matrix, int) - Constructor for class org.openimaj.math.matrix.ThinSingularValueDecomposition

Perform thin SVD on matrix, calculating at most ndims dimensions.

ThinSingularValueDecomposition(Matrix, int) - Constructor for class org.openimaj.math.matrix.ThinSingularValueDecomposition

Perform thin SVD on matrix, calculating at most ndims dimensions.

ThinSvdPrincipalComponentAnalysis - Class in org.openimaj.math.matrix.algorithm.pca

Compute the PCA using a thin SVD to extract the best-n principal
 components directly.

ThinSvdPrincipalComponentAnalysis(int) - Constructor for class org.openimaj.math.matrix.algorithm.pca.ThinSvdPrincipalComponentAnalysis

Construct a ThinSvdPrincipalComponentAnalysis that
 will extract the n best eigenvectors.

thirdVertex() - Method in class org.openimaj.math.geometry.shape.Triangle
 
threshold(SparseMatrix, double) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Set values below the given threshold to zero in the output matrix.

Threshold - Class in org.openimaj.math.matrix.similarity.processor

A similarity matrix processor that sets all values
 less than a threshold to 0 and all other values to
 1.

Threshold(double) - Constructor for class org.openimaj.math.matrix.similarity.processor.Threshold

Default constructor.

threshold - Variable in class org.openimaj.math.matrix.similarity.processor.Threshold
 
ThresholdDistanceCheck - Class in org.openimaj.math.util.distance

Implementation of a DistanceCheck that tests the distance against a
 fixed threshold.

ThresholdDistanceCheck(double) - Constructor for class org.openimaj.math.util.distance.ThresholdDistanceCheck

Construct with the given threshold for checking the distance.

times(DiagonalMatrix, SparseMatrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Left multiply two matrices: R = D .


times(SparseMatrix, DiagonalMatrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Right multiply two matrices: R = A .


times(Matrix, double) - Static method in class org.openimaj.math.matrix.MatrixUtils

Multiply a matrix by a constant inplace, returning the matrix.

timesInplace(Matrix, double) - Static method in class org.openimaj.math.matrix.CFMatrixUtils

Multiply a matrix by a constant, storing the results in the input matrix.

timesInplace(SparseMatrix, SparseMatrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
 
timesInplace(Matrix, Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
 
to - Variable in class org.openimaj.math.graph.SimpleEdge

Second vertex

toColJama(Vector) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
 
toEllipse() - Method in class org.openimaj.math.geometry.shape.Polygon

Using
 EllipseUtilities.ellipseFromCovariance(float, float, Matrix, float)
 and the Polygon.calculateSecondMomentCentralised() return the Ellipse
 best fitting the shape of this polygon.

toJama(Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
 
toJavaString(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Format a matrix as a single-line string suitable for using in java

toMatlabString(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Format a matrix as a single-line string suitable for using in matlab or
 octave

toMLArray(String, Matrix) - Static method in class org.openimaj.math.matrix.CFMatrixUtils

Convert a matlab MLArray to a Matrix

toMTJ(Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
 
top - Variable in class org.openimaj.math.geometry.shape.util.polygon.EdgeNode

Edge upper (x, y) coordinate

top_node - Variable in class org.openimaj.math.geometry.shape.util.polygon.AetTree
 
top_node - Variable in class org.openimaj.math.geometry.shape.util.polygon.LmtTable
 
TopPolygonNode - Class in org.openimaj.math.geometry.shape.util.polygon
 
TopPolygonNode() - Constructor for class org.openimaj.math.geometry.shape.util.polygon.TopPolygonNode
 
toPythonString(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Format a matrix as a single-line string suitable for using in python

toRowJama(Vector) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils
 
toString() - Method in class org.openimaj.math.geometry.line.Line2d
 
toString() - Method in class org.openimaj.math.geometry.point.Point2dImpl
 
toString() - Method in class org.openimaj.math.geometry.point.Point3dImpl
 
toString() - Method in class org.openimaj.math.geometry.point.PointList
 
toString() - Method in class org.openimaj.math.geometry.shape.Circle
 
toString() - Method in class org.openimaj.math.geometry.shape.Ellipse
 
toString() - Method in class org.openimaj.math.geometry.shape.Polygon

Displays the complete list of vertices unless the number of vertices is
 greater than 10 - then a sublist is shown of 5 from the start and 5 from
 the end separated by ellipses.

toString() - Method in class org.openimaj.math.geometry.shape.Rectangle
 
toString() - Method in class org.openimaj.math.geometry.shape.Rectangle3D
 
toString() - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
 
toString() - Method in class org.openimaj.math.geometry.shape.Triangle
 
toString() - Method in class org.openimaj.math.geometry.shape.util.polygon.BundleState
 
toString() - Method in class org.openimaj.math.geometry.shape.util.polygon.OperationType
 
toString() - Method in class org.openimaj.math.geometry.transforms.AffineTransformModel
 
toString() - Method in class org.openimaj.math.geometry.transforms.AffineTransformModel3d
 
toString() - Method in class org.openimaj.math.matrix.algorithm.pca.PrincipalComponentAnalysis
 
toString() - Method in class org.openimaj.math.matrix.EigenValueVectorPair
 
toString(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Generate a String representation of a matrix.

toString() - Method in class org.openimaj.math.matrix.similarity.processor.MultidimensionalScaling
 
toString() - Method in class org.openimaj.math.matrix.similarity.SimilarityMatrix
 
toString() - Method in class org.openimaj.math.model.LeastSquaresLinearModel
 
toString() - Method in class org.openimaj.math.statistics.distribution.AbstractMultivariateGaussian
 
toString() - Method in class org.openimaj.math.util.Complex

Text representation of this complex number.

toUndirectedUnweightedGraph(double) - Method in class org.openimaj.math.matrix.similarity.SimilarityMatrix

Convert the similarity matrix to an unweighted, undirected
 graph representation.

toUnitVector() - Method in class org.openimaj.math.geometry.line.Line2d

Convert the line to a unit vector

trace(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils
 
train(double[][]) - Method in class org.openimaj.math.matrix.algorithm.whitening.PCAWhitening
 
train(double[][]) - Method in class org.openimaj.math.matrix.algorithm.whitening.WhiteningTransform

Train the whitening transform with the given features.

train(double[][]) - Method in class org.openimaj.math.matrix.algorithm.whitening.ZCAWhitening
 
train(double[][]) - Method in interface org.openimaj.math.statistics.normalisation.TrainableNormaliser

Train the normaliser.

train(double[][]) - Method in class org.openimaj.math.statistics.normalisation.ZScore
 
TrainableNormaliser - Interface in org.openimaj.math.statistics.normalisation

Interface for Normalisers that need to be pre-trained in order to
 compute relevant statistics to perform the actual normalisation operation.

transform(Matrix) - Method in interface org.openimaj.math.geometry.GeometricObject2d

Apply a 3x3 transform matrix to a copy of the GeometricObject2d and
 return it

transform(Matrix) - Method in class org.openimaj.math.geometry.line.Line2d

Transform a line.

transform(Matrix) - Method in class org.openimaj.math.geometry.point.AbstractPoint2d
 
transform(Matrix) - Method in interface org.openimaj.math.geometry.point.Point2d

Transform the point by the given matrix

transform(Matrix) - Method in class org.openimaj.math.geometry.point.Point2dImpl
 
transform(Matrix) - Method in interface org.openimaj.math.geometry.point.Point3d

Transform the point by the given matrix

transform(Matrix) - Method in class org.openimaj.math.geometry.point.Point3dImpl
 
transform(Matrix) - Method in class org.openimaj.math.geometry.point.PointList

Apply a 3x3 transform matrix to a copy of the PointList and
 return it

transform(Matrix) - Method in class org.openimaj.math.geometry.shape.Circle
 
transform(Matrix) - Method in class org.openimaj.math.geometry.shape.Ellipse
 
transform(Matrix) - Method in class org.openimaj.math.geometry.shape.Polygon

Apply a 3x3 transform matrix to a copy of the polygon and return it

transform(Matrix) - Method in class org.openimaj.math.geometry.shape.Rectangle
 
transform(Matrix) - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
 
transform(Matrix) - Method in interface org.openimaj.math.geometry.shape.Shape
 
transform(Matrix) - Method in class org.openimaj.math.geometry.shape.Triangle
 
transform - Variable in class org.openimaj.math.geometry.transforms.AffineTransformModel
 
transform - Variable in class org.openimaj.math.geometry.transforms.AffineTransformModel3d
 
transform - Variable in class org.openimaj.math.matrix.algorithm.whitening.PCAWhitening
 
transformAffine(Matrix) - Method in class org.openimaj.math.geometry.shape.Ellipse
 
transformAffineCovar(Matrix) - Method in class org.openimaj.math.geometry.shape.Ellipse
 
TransformedSITR2d<M extends Model<Point2d,Point2d>> - Class in org.openimaj.math.geometry.transforms.residuals

An implementation of a SingleImageTransferResidual2d that
 pre-transforms both sets of points by predetermined transforms.

TransformedSITR2d(Matrix, Matrix) - Constructor for class org.openimaj.math.geometry.transforms.residuals.TransformedSITR2d

Construct with the given transforms

transformMatrix() - Method in class org.openimaj.math.geometry.shape.Ellipse

Get the transform matrix required to turn points on a unit circle into
 the points on this ellipse.

TransformMatrixConditionCheck<M extends Model<?,?> & MatrixTransformProvider> - Class in org.openimaj.math.geometry.transforms.check

A check for Models that produce transform matrices (via the
 MatrixTransformProvider) that tests whether the condition number is
 below a threshold.

TransformMatrixConditionCheck(double) - Constructor for class org.openimaj.math.geometry.transforms.check.TransformMatrixConditionCheck

Construct the check with the given threshold.

TransformUtilities - Class in org.openimaj.math.geometry.transforms

A collection of static methods for creating transform matrices.

translate(float, float) - Method in interface org.openimaj.math.geometry.GeometricObject2d

Translate the shapes position

translate(float, float) - Method in class org.openimaj.math.geometry.line.Line2d
 
translate(float, float) - Method in class org.openimaj.math.geometry.point.AbstractPoint2d
 
translate(Point2d) - Method in class org.openimaj.math.geometry.point.AbstractPoint2d
 
translate(float, float) - Method in interface org.openimaj.math.geometry.point.Point2d

Translate the position of the point by the given amounts

translate(Point2d) - Method in interface org.openimaj.math.geometry.point.Point2d

Translate the position of the point by the given amounts

translate(float, float) - Method in class org.openimaj.math.geometry.point.Point2dImpl
 
translate(Point2d) - Method in class org.openimaj.math.geometry.point.Point2dImpl
 
translate(double, double, double) - Method in interface org.openimaj.math.geometry.point.Point3d

Translate the position of the point by the given amounts

translate(Point3d) - Method in interface org.openimaj.math.geometry.point.Point3d

Translate the position of the point by the given amounts

translate(double, double, double) - Method in class org.openimaj.math.geometry.point.Point3dImpl
 
translate(Point3d) - Method in class org.openimaj.math.geometry.point.Point3dImpl
 
translate(float, float) - Method in class org.openimaj.math.geometry.point.PointList

Translate the PointLists position

translate(float, float) - Method in class org.openimaj.math.geometry.shape.Circle
 
translate(float, float) - Method in class org.openimaj.math.geometry.shape.Ellipse
 
translate(float, float) - Method in class org.openimaj.math.geometry.shape.Polygon

Translate the polygons position

translate(float, float) - Method in class org.openimaj.math.geometry.shape.Rectangle
 
translate(float, float) - Method in class org.openimaj.math.geometry.shape.RotatedRectangle
 
translate(float, float) - Method in class org.openimaj.math.geometry.shape.Triangle
 
translateMatrix(double, double) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities

Construct a translation.

translateToPointMatrix(Point2d, Point2d) - Static method in class org.openimaj.math.geometry.transforms.TransformUtilities

Given two points, get a transform matrix that takes points from point a
 to point b

transpose(T) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Transpose a matrix, returning a new matrix.

transposeDotProduct(Matrix, Matrix) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Compute A^T .

transposeMultiply(Vector) - Method in class org.openimaj.math.matrix.DiagonalMatrix
 
transposeNonTransposeMultiply(Vector) - Method in class org.openimaj.math.matrix.DiagonalMatrix
 
Triangle - Class in org.openimaj.math.geometry.shape

A triangle shape

Triangle(Point2d, Point2d, Point2d) - Constructor for class org.openimaj.math.geometry.shape.Triangle

Construct a Triangle with the given vertices.

Triangle(Point2d[]) - Constructor for class org.openimaj.math.geometry.shape.Triangle

Construct a Triangle with the given vertices.

triangles - Variable in class org.openimaj.math.geometry.shape.TriangulatedPolygon
 
triangulate(List<? extends Point2d>) - Static method in class org.openimaj.math.geometry.triangulation.DelaunayTriangulator

Trianglate a set of vertices.

TriangulatedPolygon - Class in org.openimaj.math.geometry.shape

A polygon that has been broken into triangles.

TriangulatedPolygon(Polygon) - Constructor for class org.openimaj.math.geometry.shape.TriangulatedPolygon

Construct a TriangulatedPolygon with a polygon.

TriangulatedPolygon(Shape) - Constructor for class org.openimaj.math.geometry.shape.TriangulatedPolygon

Construct a TriangulatedPolygon with a shape.

type - Variable in class org.openimaj.math.geometry.line.Line2d.IntersectionResult

The type of intersection

type - Variable in class org.openimaj.math.geometry.shape.util.polygon.EdgeNode

PolygonUtils / subject edge flag





U

U - Variable in class org.openimaj.math.matrix.ThinSingularValueDecomposition

The U matrix

UNBUNDLED - Static variable in class org.openimaj.math.geometry.shape.util.polygon.BundleState
 
union(Polygon) - Method in class org.openimaj.math.geometry.shape.Polygon

Returns the union of this polygon and the given polygon.

union(Rectangle) - Method in class org.openimaj.math.geometry.shape.Rectangle

Find the rectangle that just contains this rectangle and another
 rectangle.

union(Polygon, Polygon, Class<Polygon>) - Method in class org.openimaj.math.geometry.shape.util.PolygonUtils

Return the union of p1 and p2 where the return
 type is of polyClass.

union(Polygon, Polygon) - Method in class org.openimaj.math.geometry.shape.util.PolygonUtils

Return the union of p1 and p2 where the return
 type is of PolyDefault.

UnivariateGaussianNaiveBayesModel<T> - Class in org.openimaj.math.model

An implementation of a EstimatableModel that uses a
 VectorNaiveBayesCategorizer to associate a univariate (a
 Double) with a category.

UnivariateGaussianNaiveBayesModel() - Constructor for class org.openimaj.math.model.UnivariateGaussianNaiveBayesModel

Default constructor.

UnivariateGaussianNaiveBayesModel(VectorNaiveBayesCategorizer<T, UnivariateGaussian.PDF>) - Constructor for class org.openimaj.math.model.UnivariateGaussianNaiveBayesModel

Construct with a pre-trained model.

UnivariateKernel - Interface in org.openimaj.math.statistics.distribution.kernel

A Univariate kernel (i.e.

unpackByte(String) - Static method in class org.openimaj.math.util.distance.HammingUtils

Unpack a binary string ("10011...") into a byte

unpackDouble(String) - Static method in class org.openimaj.math.util.distance.HammingUtils

Unpack a binary string ("10011...") into a double

unpackFloat(String) - Static method in class org.openimaj.math.util.distance.HammingUtils

Unpack a binary string ("10011...") into a float

unpackInt(String) - Static method in class org.openimaj.math.util.distance.HammingUtils

Unpack a binary string ("10011...") into an int

unpackLong(String) - Static method in class org.openimaj.math.util.distance.HammingUtils

Unpack a binary string ("10011...") into a long

unpackShort(String) - Static method in class org.openimaj.math.util.distance.HammingUtils

Unpack a binary string ("10011...") into a short

unwrap() - Method in class org.openimaj.math.matrix.JamaDenseMatrix
 
update(double[]) - Method in class org.openimaj.math.matrix.MeanVector

Update the mean.

update(double[], boolean) - Method in class org.openimaj.math.matrix.MeanVector

Update the mean.

UpdateableCholeskyDecomposition - Class in org.openimaj.math.matrix

Cholesky Update and Downdate

UpdateableCholeskyDecomposition(Matrix) - Constructor for class org.openimaj.math.matrix.UpdateableCholeskyDecomposition
 
updateLabeling(double) - Method in class org.openimaj.math.combinatorics.optimisation.HungarianAlgorithm

Update labels with the specified slack by adding the slack value for
 committed workers and by subtracting the slack value for committed jobs.

used() - Method in class org.openimaj.math.matrix.DiagonalMatrix
 
used() - Method in class org.openimaj.math.matrix.JamaDenseMatrix
 




V

valsToIndex(double[]) - Static method in class org.openimaj.math.matrix.MatrixUtils
 
value(RealVector) - Method in class org.openimaj.math.geometry.transforms.FundamentalRefinement.Base
 
valueOf(String) - Static method in enum org.openimaj.math.geometry.line.Line2d.IntersectionType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.openimaj.math.geometry.shape.util.GrahamScan.Turn

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.openimaj.math.geometry.shape.util.RotatingCalipers.Corner

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.openimaj.math.geometry.transforms.FundamentalRefinement.Parameterisation

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.openimaj.math.geometry.transforms.FundamentalRefinement

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.openimaj.math.geometry.transforms.HomographyRefinement

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.openimaj.math.statistics.distribution.kernel.StandardUnivariateKernels

Returns the enum constant of this type with the specified name.

values() - Static method in enum org.openimaj.math.geometry.line.Line2d.IntersectionType

Returns an array containing the constants of this enum type, in
the order they are declared.

values() - Static method in enum org.openimaj.math.geometry.shape.util.GrahamScan.Turn

Returns an array containing the constants of this enum type, in
the order they are declared.

values() - Static method in enum org.openimaj.math.geometry.shape.util.RotatingCalipers.Corner

Returns an array containing the constants of this enum type, in
the order they are declared.

values() - Static method in enum org.openimaj.math.geometry.transforms.FundamentalRefinement.Parameterisation

Returns an array containing the constants of this enum type, in
the order they are declared.

values() - Static method in enum org.openimaj.math.geometry.transforms.FundamentalRefinement

Returns an array containing the constants of this enum type, in
the order they are declared.

values() - Static method in enum org.openimaj.math.geometry.transforms.HomographyRefinement

Returns an array containing the constants of this enum type, in
the order they are declared.

values() - Static method in enum org.openimaj.math.statistics.distribution.kernel.StandardUnivariateKernels

Returns an array containing the constants of this enum type, in
the order they are declared.

var(double[]) - Static method in class org.openimaj.math.util.DoubleArrayStatsUtils

Calculate the sample variance of a one dimensional double array.

var(double[][]) - Static method in class org.openimaj.math.util.DoubleArrayStatsUtils

Calculate the sample variance of a one dimensional double array.

var(float[]) - Static method in class org.openimaj.math.util.FloatArrayStatsUtils

Calculate the variance of a one dimensional float array.

var(float[][]) - Static method in class org.openimaj.math.util.FloatArrayStatsUtils

Calculate the variance of a one dimensional float array.

variance - Variable in class org.openimaj.math.statistics.distribution.DiagonalMultivariateGaussian

The diagonal of the covariance matrix

variance - Variable in class org.openimaj.math.statistics.distribution.SphericalMultivariateGaussian

The variance

variance() - Method in class org.openimaj.math.util.RunningStat

Returns the running variance

vec() - Method in class org.openimaj.math.matrix.MeanVector
 
vectorArrayToMatrix(Vector[], boolean) - Method in class org.openimaj.math.matrix.ThinSingularValueDecomposition
 
vertex - Variable in class org.openimaj.math.geometry.shape.util.polygon.EdgeNode

Piggy-backed contour vertex
 data

VertexType - Class in org.openimaj.math.geometry.shape.util.polygon

Edge intersection classes

VertexType() - Constructor for class org.openimaj.math.geometry.shape.util.polygon.VertexType
 
vertices - Variable in class org.openimaj.math.geometry.shape.Triangle

The vertices of the triangle

Voronoi - Class in org.openimaj.math.geometry.triangulation

Static methods for the computation of a Voronoi diagram (aka Dirichlet
 tessellation) from a set of points.

vstack(MatrixFactory<? extends Matrix>, Matrix...) - Static method in class org.openimaj.math.matrix.CFMatrixUtils

Stack matrices vertically

vstack(Matrix...) - Static method in class org.openimaj.math.matrix.CFMatrixUtils

Stack matrices vertically

vstack(Matrix...) - Static method in class org.openimaj.math.matrix.MatlibMatrixUtils

Stack matrices vertically

Vt - Variable in class org.openimaj.math.matrix.ThinSingularValueDecomposition

The transpose of the V matrix





W

weight - Variable in class org.openimaj.math.graph.SimpleWeightedEdge

The edge weight

weights - Variable in class org.openimaj.math.statistics.distribution.MixtureOfGaussians

The weight of each gaussian

whiten(double[]) - Method in class org.openimaj.math.matrix.algorithm.whitening.PCAWhitening
 
whiten(double[]) - Method in class org.openimaj.math.matrix.algorithm.whitening.WhiteningTransform

Apply the whitening transform to the given vector.

whiten(double[][]) - Method in class org.openimaj.math.matrix.algorithm.whitening.WhiteningTransform

Apply the whitening transform to the given vectors.

WhiteningTransform - Class in org.openimaj.math.matrix.algorithm.whitening

Abstract base class for whitening transforms ("sphering").

WhiteningTransform() - Constructor for class org.openimaj.math.matrix.algorithm.whitening.WhiteningTransform
 
width - Variable in class org.openimaj.math.geometry.shape.Rectangle

The width of the rectangle

width - Variable in class org.openimaj.math.geometry.shape.RotatedRectangle

The width of the rotated rectangle (Note that this is different to the
 width returned by RotatedRectangle.getWidth() which is the width of the regular
 bounding box)

writeASCII(PrintWriter) - Method in class org.openimaj.math.geometry.point.AbstractPoint2d
 
writeASCII(PrintWriter) - Method in class org.openimaj.math.geometry.point.PayloadCoordinate
 
writeASCII(PrintWriter) - Method in class org.openimaj.math.geometry.point.Point2dImpl
 
writeASCII(PrintWriter) - Method in class org.openimaj.math.geometry.point.Point3dImpl
 
writeASCII(PrintWriter) - Method in class org.openimaj.math.geometry.shape.Rectangle
 
writeASCII(PrintWriter) - Method in class org.openimaj.math.matrix.ReadWriteableMatrix
 
writeASCII(PrintWriter) - Method in class org.openimaj.math.matrix.similarity.SimilarityMatrix
 
writeBinary(DataOutput) - Method in class org.openimaj.math.geometry.point.AbstractPoint2d
 
writeBinary(DataOutput) - Method in class org.openimaj.math.geometry.point.PayloadCoordinate
 
writeBinary(DataOutput) - Method in class org.openimaj.math.geometry.point.Point2dImpl
 
writeBinary(DataOutput) - Method in class org.openimaj.math.geometry.point.Point3dImpl
 
writeBinary(DataOutput) - Method in class org.openimaj.math.geometry.shape.Rectangle
 
writeBinary(DataOutput) - Method in class org.openimaj.math.matrix.ReadWriteableMatrix
 
writeBinary(DataOutput) - Method in class org.openimaj.math.matrix.similarity.SimilarityMatrix
 




X

x - Variable in class org.openimaj.math.geometry.point.Point2dImpl

The x-coordinate

x - Variable in class org.openimaj.math.geometry.point.Point3dImpl

The x-ordinate

x - Variable in class org.openimaj.math.geometry.shape.Rectangle

The x-coordinate of the top-left of the rectangle

xb - Variable in class org.openimaj.math.geometry.shape.util.polygon.EdgeNode

Scanbeam bottom x coordinate

xb - Variable in class org.openimaj.math.geometry.shape.util.polygon.StNode

Scanbeam bottom x coordinate

xor(Polygon) - Method in class org.openimaj.math.geometry.shape.Polygon

Returns the XOR of this polygon and the given polygon.

xor(Polygon, Polygon, Class<Polygon>) - Method in class org.openimaj.math.geometry.shape.util.PolygonUtils

Return the xor of p1 and p2 where the return
 type is of polyClass.

xor(Polygon, Polygon) - Method in class org.openimaj.math.geometry.shape.util.PolygonUtils

Return the xor of p1 and p2 where the return
 type is of PolyDefault.

xRotation - Variable in class org.openimaj.math.geometry.shape.Rectangle3D

The rotation in the x axis

xt - Variable in class org.openimaj.math.geometry.shape.util.polygon.EdgeNode

Scanbeam top x coordinate

xt - Variable in class org.openimaj.math.geometry.shape.util.polygon.StNode

Scanbeam top x coordinate





Y

y - Variable in class org.openimaj.math.geometry.point.Point2dImpl

The y-coordinate

y - Variable in class org.openimaj.math.geometry.point.Point3dImpl

The y-ordinate

y - Variable in class org.openimaj.math.geometry.shape.Rectangle

The y-coordinate of the top-left of the rectangle

y - Variable in class org.openimaj.math.geometry.shape.util.polygon.LmtNode

Y coordinate at local minimum

y - Variable in class org.openimaj.math.geometry.shape.util.polygon.ScanBeamTree
 
yRotation - Variable in class org.openimaj.math.geometry.shape.Rectangle3D

The rotation in the x axis





Z

z - Variable in class org.openimaj.math.geometry.point.Point3dImpl

The z-ordinate

z - Variable in class org.openimaj.math.geometry.shape.Rectangle3D

The Z position

ZCAWhitening - Class in org.openimaj.math.matrix.algorithm.whitening

The ZCA Whitening transform.

ZCAWhitening(double, Normaliser) - Constructor for class org.openimaj.math.matrix.algorithm.whitening.ZCAWhitening

Construct with the given variance regularization parameter and data
 normalisation strategy.

zero(Matrix) - Static method in class org.openimaj.math.matrix.MatrixUtils

Zero the matrix

zeros(int) - Static method in class org.openimaj.math.matrix.DiagonalMatrix
 
zRotation - Variable in class org.openimaj.math.geometry.shape.Rectangle3D

The rotation in the x axis

ZScore - Class in org.openimaj.math.statistics.normalisation

z-score normalisation (standardisation).

ZScore() - Constructor for class org.openimaj.math.statistics.normalisation.ZScore

Construct without regularisation.

ZScore(double) - Constructor for class org.openimaj.math.statistics.normalisation.ZScore

Construct with regularisation.


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